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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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pyOpenMS/pxds/DeNovoIonScoring.pxd
 
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from libcpp.vector cimport vector as libcpp_vector
 
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from DefaultParamHandler cimport *
 
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from MSSpectrum cimport *
 
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from MSExperiment cimport *
 
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from ChromatogramPeak cimport *
 
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from RichPeak1D cimport *
 
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cdef extern from "<OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h>" namespace "OpenMS":
 
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    cdef cppclass DeNovoIonScoring "OpenMS::DeNovoIonScoring":
 
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        # wrap-ignore
 
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        DeNovoIonScoring() nogil except +
 
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        DeNovoIonScoring(DeNovoIonScoring) nogil except +
 
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        void getIonScores(libcpp_vector[ IonScore_DeNovoIonScoring ] &ion_scores, MSSpectrum[RichPeak1D] &spec) nogil except +
 
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        void getIonScores(libcpp_vector[ libcpp_vector[ IonScore_DeNovoIonScoring ] ] &ion_scores, MSExperiment[RichPeak1D, ChromatogramPeak] &exp) nogil except + #wrap-ignore
 
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cdef extern from "<OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h>" namespace "OpenMS::DeNovoIonScoring":
 
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    cdef cppclass IonScore_DeNovoIonScoring "OpenMS::DeNovoIonScoring::IonScore":
 
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        IonScore_DeNovoIonScoring() nogil except +
 
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        IonScore_DeNovoIonScoring(IonScore_DeNovoIonScoring) nogil except +
 
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        # score
 
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        DoubleReal score
 
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        # position of the ion
 
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        DoubleReal position
 
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        # index of peak in the spectrum, -1 if not in spectrum
 
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        ptrdiff_t index
 
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