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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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doc/html/classOpenMS_1_1CompNovoIonScoringBase.html
 
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<HTML>
 
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<HEAD>
 
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<TITLE>CompNovoIonScoringBase Class Reference</TITLE>
 
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<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
 
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<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
 
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</HEAD>
 
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<BODY BGCOLOR="#FFFFFF">
 
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<A href="index.html">Home</A> &nbsp;&middot;
 
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<A href="classes.html">Classes</A> &nbsp;&middot;
 
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<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
 
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<A href="modules.html">Modules</A> &nbsp;&middot;
 
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<A href="functions_func.html">Members</A> &nbsp;&middot;
 
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<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
 
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<A href="pages.html">Related Pages</A>
 
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
 
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<!-- Generated by Doxygen 1.8.5 -->
 
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<div id="nav-path" class="navpath">
 
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  <ul>
 
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a></li>  </ul>
 
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</div>
 
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</div><!-- top -->
 
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<div class="header">
 
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  <div class="summary">
 
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<a href="#nested-classes">Classes</a> &#124;
 
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<a href="#pub-types">Public Types</a> &#124;
 
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<a href="#pub-methods">Public Member Functions</a> &#124;
 
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<a href="#pro-methods">Protected Member Functions</a> &#124;
 
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<a href="#pro-attribs">Protected Attributes</a> &#124;
 
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<a href="classOpenMS_1_1CompNovoIonScoringBase-members.html">List of all members</a>  </div>
 
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  <div class="headertitle">
 
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<div class="title">CompNovoIonScoringBase Class Reference<span class="mlabels"><span class="mlabel">abstract</span></span></div>  </div>
 
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</div><!--header-->
 
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<div class="contents">
 
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<p>run with <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html" title="run with CompNovoIonScoringBase ">CompNovoIonScoringBase</a>  
 
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 <a href="classOpenMS_1_1CompNovoIonScoringBase.html#details">More...</a></p>
 
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<p><code>#include &lt;<a class="el" href="CompNovoIonScoringBase_8h_source.html">OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h</a>&gt;</code></p>
 
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<div class="dynheader">
 
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Inheritance diagram for CompNovoIonScoringBase:</div>
 
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<div class="dyncontent">
 
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 <div class="center">
 
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  <img src="classOpenMS_1_1CompNovoIonScoringBase.png" usemap="#CompNovoIonScoringBase_map" alt=""/>
 
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  <map id="CompNovoIonScoringBase_map" name="CompNovoIonScoringBase_map">
 
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<area href="classOpenMS_1_1DefaultParamHandler.html" title="A base class for all classes handling default parameters. " alt="DefaultParamHandler" shape="rect" coords="86,0,249,24"/>
 
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<area href="classOpenMS_1_1CompNovoIonScoring.html" title="run with CompNovoIonScoring " alt="CompNovoIonScoring" shape="rect" coords="0,112,163,136"/>
 
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<area href="classOpenMS_1_1CompNovoIonScoringCID.html" title="run with CompNovoIonScoringCID " alt="CompNovoIonScoringCID" shape="rect" coords="173,112,336,136"/>
 
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</map>
 
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 </div></div>
 
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<table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
 
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Classes</h2></td></tr>
 
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a></td></tr>
 
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<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-types"></a>
 
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Public Types</h2></td></tr>
 
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<tr class="memitem:af7e67702d51d0eff4c3db8ea8763a59f"><td class="memItemLeft" align="right" valign="top">enum &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59f">IsotopeType</a> { <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59fa283df3974c567b21c067198a24cd78e6">PARENT</a> = 0, 
 
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<a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59fa1fbfc6416a0d78a967e48395e021d7c7">CHILD</a> = 1, 
 
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<a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59fa59487ab84bbc1ed5dab37c0ff823a0af">LONE</a> = 2
 
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 }</td></tr>
 
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<tr class="separator:af7e67702d51d0eff4c3db8ea8763a59f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
 
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Public Member Functions</h2></td></tr>
 
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<tr class="memitem:abf39e16e702bca3d0d6ac3050ebcdd9f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#abf39e16e702bca3d0d6ac3050ebcdd9f">operator=</a> (const <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> &amp;source)</td></tr>
 
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<tr class="separator:abf39e16e702bca3d0d6ac3050ebcdd9f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr><td colspan="2"><div class="groupHeader">constructors and destructors</div></td></tr>
 
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<tr class="memitem:a912b09e6891d017ed63c50a657759a2f"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a912b09e6891d017ed63c50a657759a2f">CompNovoIonScoringBase</a> ()</td></tr>
 
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<tr class="memdesc:a912b09e6891d017ed63c50a657759a2f"><td class="mdescLeft">&#160;</td><td class="mdescRight">default constructor  <a href="#a912b09e6891d017ed63c50a657759a2f">More...</a><br/></td></tr>
 
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<tr class="separator:a912b09e6891d017ed63c50a657759a2f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a60ecfa6cd5f9d2a33d913e74d035c914"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a60ecfa6cd5f9d2a33d913e74d035c914">CompNovoIonScoringBase</a> (const <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> &amp;source)</td></tr>
 
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<tr class="memdesc:a60ecfa6cd5f9d2a33d913e74d035c914"><td class="mdescLeft">&#160;</td><td class="mdescRight">copy constructor  <a href="#a60ecfa6cd5f9d2a33d913e74d035c914">More...</a><br/></td></tr>
 
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<tr class="separator:a60ecfa6cd5f9d2a33d913e74d035c914"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a24aaef24a3d25a565c75a47f2a8df6d7"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a24aaef24a3d25a565c75a47f2a8df6d7">~CompNovoIonScoringBase</a> ()</td></tr>
 
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<tr class="memdesc:a24aaef24a3d25a565c75a47f2a8df6d7"><td class="mdescLeft">&#160;</td><td class="mdescRight">destructor  <a href="#a24aaef24a3d25a565c75a47f2a8df6d7">More...</a><br/></td></tr>
 
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<tr class="separator:a24aaef24a3d25a565c75a47f2a8df6d7"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr><td colspan="2"><div class="groupHeader">Accessors</div></td></tr>
 
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<tr class="memitem:a820388f74f63cbdc14d9aa1293eb3588"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a820388f74f63cbdc14d9aa1293eb3588">scoreIsotopes</a> (const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;CID_spec, <a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a> it, <a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> charge)</td></tr>
 
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<tr class="separator:a820388f74f63cbdc14d9aa1293eb3588"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="inherit_header pub_methods_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/>&#160;Public Member Functions inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
 
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<tr class="memitem:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#afb6802fda161cb0c1a4a05597f94aecc">DefaultParamHandler</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &amp;name)</td></tr>
 
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<tr class="memdesc:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Constructor with name that is displayed in error messages.  <a href="#afb6802fda161cb0c1a4a05597f94aecc">More...</a><br/></td></tr>
 
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<tr class="separator:afb6802fda161cb0c1a4a05597f94aecc inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a954da7eef3cfddda446574eaadd20abb">DefaultParamHandler</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &amp;rhs)</td></tr>
 
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<tr class="memdesc:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Copy constructor.  <a href="#a954da7eef3cfddda446574eaadd20abb">More...</a><br/></td></tr>
 
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<tr class="separator:a954da7eef3cfddda446574eaadd20abb inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a11e9d6dd34fe8860874aa8abe0ec121b">~DefaultParamHandler</a> ()</td></tr>
 
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<tr class="memdesc:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Destructor.  <a href="#a11e9d6dd34fe8860874aa8abe0ec121b">More...</a><br/></td></tr>
 
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<tr class="separator:a11e9d6dd34fe8860874aa8abe0ec121b inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ae6b6d68036a573a44f6609460ba2dfb6">operator=</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &amp;rhs)</td></tr>
 
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<tr class="memdesc:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Assignment operator.  <a href="#ae6b6d68036a573a44f6609460ba2dfb6">More...</a><br/></td></tr>
 
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<tr class="separator:ae6b6d68036a573a44f6609460ba2dfb6 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">virtual bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac435f2dd4d9f9328db83af97129a8d7e">operator==</a> (const <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a> &amp;rhs) const </td></tr>
 
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<tr class="memdesc:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Equality operator.  <a href="#ac435f2dd4d9f9328db83af97129a8d7e">More...</a><br/></td></tr>
 
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<tr class="separator:ac435f2dd4d9f9328db83af97129a8d7e inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#abc8067511cfc949ae942ea2b08588f81">setParameters</a> (const <a class="el" href="classOpenMS_1_1Param.html">Param</a> &amp;param)</td></tr>
 
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<tr class="memdesc:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Sets the parameters.  <a href="#abc8067511cfc949ae942ea2b08588f81">More...</a><br/></td></tr>
 
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<tr class="separator:abc8067511cfc949ae942ea2b08588f81 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
100
<tr class="memitem:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Param.html">Param</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7f6aab5a7dfbdd1c062a4352a29361f3">getParameters</a> () const </td></tr>
 
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<tr class="memdesc:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Non-mutable access to the parameters.  <a href="#a7f6aab5a7dfbdd1c062a4352a29361f3">More...</a><br/></td></tr>
 
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<tr class="separator:a7f6aab5a7dfbdd1c062a4352a29361f3 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
103
<tr class="memitem:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Param.html">Param</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a02f02fa9832ca3e8d47c575a39803a2a">getDefaults</a> () const </td></tr>
 
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<tr class="memdesc:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Non-mutable access to the default parameters.  <a href="#a02f02fa9832ca3e8d47c575a39803a2a">More...</a><br/></td></tr>
 
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<tr class="separator:a02f02fa9832ca3e8d47c575a39803a2a inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1String.html">String</a> &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aaee0f2845288173de9f6ad47e6ad31d5">getName</a> () const </td></tr>
 
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<tr class="memdesc:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Non-mutable access to the name.  <a href="#aaee0f2845288173de9f6ad47e6ad31d5">More...</a><br/></td></tr>
 
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<tr class="separator:aaee0f2845288173de9f6ad47e6ad31d5 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a77d37f2e1c12e8bd33ea0e660a89e927">setName</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &amp;name)</td></tr>
 
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<tr class="memdesc:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Mutable access to the name.  <a href="#a77d37f2e1c12e8bd33ea0e660a89e927">More...</a><br/></td></tr>
 
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<tr class="separator:a77d37f2e1c12e8bd33ea0e660a89e927 inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">const std::vector&lt; <a class="el" href="classOpenMS_1_1String.html">String</a> &gt; &amp;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a768d4a2093627a2f34728656a9721bdf">getSubsections</a> () const </td></tr>
 
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<tr class="memdesc:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Non-mutable access to the registered subsections.  <a href="#a768d4a2093627a2f34728656a9721bdf">More...</a><br/></td></tr>
 
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<tr class="separator:a768d4a2093627a2f34728656a9721bdf inherit pub_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-methods"></a>
 
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Protected Member Functions</h2></td></tr>
 
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<tr class="memitem:aaf258e1a9846d9b238ee4b3005ad3ee9"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#aaf258e1a9846d9b238ee4b3005ad3ee9">updateMembers_</a> ()</td></tr>
 
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<tr class="memdesc:aaf258e1a9846d9b238ee4b3005ad3ee9"><td class="mdescLeft">&#160;</td><td class="mdescRight">update members method from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html" title="A base class for all classes handling default parameters. ">DefaultParamHandler</a> to update the members  <a href="#aaf258e1a9846d9b238ee4b3005ad3ee9">More...</a><br/></td></tr>
 
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<tr class="separator:aaf258e1a9846d9b238ee4b3005ad3ee9"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:adf430f3ff244e742494ffc52413671c0"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59f">IsotopeType</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#adf430f3ff244e742494ffc52413671c0">classifyIsotopes_</a> (const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;spec, <a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a> it)</td></tr>
 
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<tr class="separator:adf430f3ff244e742494ffc52413671c0"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a618ca73dc5f344d7b2401248faa0f5f7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a618ca73dc5f344d7b2401248faa0f5f7">scoreIsotopes_</a> (const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;spec, <a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a> it, <a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>, <a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a> &gt; &amp;CID_nodes, <a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> charge=1)</td></tr>
 
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<tr class="separator:a618ca73dc5f344d7b2401248faa0f5f7"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a280bb7412e321418ec2312c4ccf884be"><td class="memItemLeft" align="right" valign="top">virtual void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a280bb7412e321418ec2312c4ccf884be">scoreWitnessSet_</a> (<a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> charge, <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> precursor_weight, <a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>, <a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a> &gt; &amp;CID_nodes, const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;CID_orig_spec)=0</td></tr>
 
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<tr class="separator:a280bb7412e321418ec2312c4ccf884be"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a7cd6a61d83eec5a9c1c4603e0e0724b9"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a7cd6a61d83eec5a9c1c4603e0e0724b9">addSingleChargedIons_</a> (<a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>, <a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a> &gt; &amp;ion_scores, <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;CID_spec)</td></tr>
 
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<tr class="separator:a7cd6a61d83eec5a9c1c4603e0e0724b9"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a65b27e7219c985ac0f9e97a493266131"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a65b27e7219c985ac0f9e97a493266131">initIsotopeDistributions_</a> ()</td></tr>
 
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<tr class="separator:a65b27e7219c985ac0f9e97a493266131"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="inherit_header pro_methods_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_methods_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/>&#160;Protected Member Functions inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
 
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<tr class="memitem:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">void&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a2802c591e6d7fd3fd9cc35f5e875d0ba">defaultsToParam_</a> ()</td></tr>
 
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<tr class="memdesc:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Updates the parameters after the defaults have been set in the constructor.  <a href="#a2802c591e6d7fd3fd9cc35f5e875d0ba">More...</a><br/></td></tr>
 
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<tr class="separator:a2802c591e6d7fd3fd9cc35f5e875d0ba inherit pro_methods_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pro-attribs"></a>
 
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Protected Attributes</h2></td></tr>
 
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<tr class="memitem:a478012ec394ab8b0d4d4ea97ba16e37f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>, std::vector<br class="typebreak"/>
 
139
&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> &gt; &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a478012ec394ab8b0d4d4ea97ba16e37f">isotope_distributions_</a></td></tr>
 
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<tr class="separator:a478012ec394ab8b0d4d4ea97ba16e37f"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a03d038e2ce9f971ebd73bcb86f417dc8"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#a03d038e2ce9f971ebd73bcb86f417dc8">fragment_mass_tolerance_</a></td></tr>
 
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<tr class="separator:a03d038e2ce9f971ebd73bcb86f417dc8"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="inherit_header pro_attribs_classOpenMS_1_1DefaultParamHandler"><td colspan="2" onclick="javascript:toggleInherit('pro_attribs_classOpenMS_1_1DefaultParamHandler')"><img src="closed.png" alt="-"/>&#160;Protected Attributes inherited from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html">DefaultParamHandler</a></td></tr>
 
144
<tr class="memitem:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Param.html">Param</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a28c73e623c63a4fe3bfceb1ae8274f39">param_</a></td></tr>
 
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<tr class="memdesc:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Container for current parameters.  <a href="#a28c73e623c63a4fe3bfceb1ae8274f39">More...</a><br/></td></tr>
 
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<tr class="separator:a28c73e623c63a4fe3bfceb1ae8274f39 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
147
<tr class="memitem:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Param.html">Param</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a761b1937850c141d0c6fff0e4d633a04">defaults_</a></td></tr>
 
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<tr class="memdesc:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Container for default parameters. This member should be filled in the constructor of derived classes!  <a href="#a761b1937850c141d0c6fff0e4d633a04">More...</a><br/></td></tr>
 
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<tr class="separator:a761b1937850c141d0c6fff0e4d633a04 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">std::vector&lt; <a class="el" href="classOpenMS_1_1String.html">String</a> &gt;&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#ac4b0e20bc59c7a5afe016c69067e428c">subsections_</a></td></tr>
 
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<tr class="memdesc:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Container for registered subsections. This member should be filled in the constructor of derived classes!  <a href="#ac4b0e20bc59c7a5afe016c69067e428c">More...</a><br/></td></tr>
 
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<tr class="separator:ac4b0e20bc59c7a5afe016c69067e428c inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a5a51f3f150b09068256195e934339a19">error_name_</a></td></tr>
 
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<tr class="memdesc:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">Name that is displayed in error messages during the parameter checking.  <a href="#a5a51f3f150b09068256195e934339a19">More...</a><br/></td></tr>
 
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<tr class="separator:a5a51f3f150b09068256195e934339a19 inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a7c3b265b697a57615da5cd3274780efd">check_defaults_</a></td></tr>
 
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<tr class="memdesc:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">If this member is set to false no checking if parameters in done;.  <a href="#a7c3b265b697a57615da5cd3274780efd">More...</a><br/></td></tr>
 
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<tr class="separator:a7c3b265b697a57615da5cd3274780efd inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memItemLeft" align="right" valign="top">bool&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1DefaultParamHandler.html#aba444910e4fccb93f91bf7ab135f508a">warn_empty_defaults_</a></td></tr>
 
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<tr class="memdesc:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="mdescLeft">&#160;</td><td class="mdescRight">If this member is set to false no warning is emitted when defaults are empty;.  <a href="#aba444910e4fccb93f91bf7ab135f508a">More...</a><br/></td></tr>
 
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<tr class="separator:aba444910e4fccb93f91bf7ab135f508a inherit pro_attribs_classOpenMS_1_1DefaultParamHandler"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table>
 
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 
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<div class="textblock"><p>run with <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html" title="run with CompNovoIonScoringBase ">CompNovoIonScoringBase</a> </p>
 
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</div><h2 class="groupheader">Member Enumeration Documentation</h2>
 
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<a class="anchor" id="af7e67702d51d0eff4c3db8ea8763a59f"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname">enum <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59f">IsotopeType</a></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<table class="fieldtable">
 
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<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="af7e67702d51d0eff4c3db8ea8763a59fa283df3974c567b21c067198a24cd78e6"></a>PARENT</em>&nbsp;</td><td class="fielddoc">
 
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</td></tr>
 
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<tr><td class="fieldname"><em><a class="anchor" id="af7e67702d51d0eff4c3db8ea8763a59fa1fbfc6416a0d78a967e48395e021d7c7"></a>CHILD</em>&nbsp;</td><td class="fielddoc">
 
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</td></tr>
 
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<tr><td class="fieldname"><em><a class="anchor" id="af7e67702d51d0eff4c3db8ea8763a59fa59487ab84bbc1ed5dab37c0ff823a0af"></a>LONE</em>&nbsp;</td><td class="fielddoc">
 
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</td></tr>
 
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</table>
 
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</div>
 
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</div>
 
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<h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 
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<a class="anchor" id="a912b09e6891d017ed63c50a657759a2f"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<p>default constructor </p>
 
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</div>
 
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</div>
 
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<a class="anchor" id="a60ecfa6cd5f9d2a33d913e74d035c914"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>source</em></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<p>copy constructor </p>
 
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</div>
 
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</div>
 
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<a class="anchor" id="a24aaef24a3d25a565c75a47f2a8df6d7"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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<table class="mlabels">
 
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  <tr>
 
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  <td class="mlabels-left">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname">virtual ~<a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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  </td>
 
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  <td class="mlabels-right">
 
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<span class="mlabels"><span class="mlabel">virtual</span></span>  </td>
 
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  </tr>
 
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</table>
 
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</div><div class="memdoc">
 
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<p>destructor </p>
 
244
 
 
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</div>
 
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</div>
 
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<h2 class="groupheader">Member Function Documentation</h2>
 
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          <td class="memname">void addSingleChargedIons_ </td>
 
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          <td>(</td>
 
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          <td class="paramtype"><a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>, <a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a> &gt; &amp;&#160;</td>
 
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          <td class="paramname"><em>ion_scores</em>, </td>
 
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          <td class="paramtype"><a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>CID_spec</em>&#160;</td>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html#af7e67702d51d0eff4c3db8ea8763a59f">IsotopeType</a> classifyIsotopes_ </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>spec</em>, </td>
 
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          <td class="paramtype"><a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a>&#160;</td>
 
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          <td class="paramname"><em>it</em>&#160;</td>
 
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          <td class="memname">void initIsotopeDistributions_ </td>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a>&amp; operator= </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="classOpenMS_1_1CompNovoIonScoringBase.html">CompNovoIonScoringBase</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>source</em></td><td>)</td>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> scoreIsotopes </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>CID_spec</em>, </td>
 
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          <td class="paramtype"><a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a>&#160;</td>
 
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          <td class="paramname"><em>it</em>, </td>
 
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          <td class="paramtype"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>&#160;</td>
 
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          <td class="paramname"><em>charge</em>&#160;</td>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> scoreIsotopes_ </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;&#160;</td>
 
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          <td class="paramtype"><a class="el" href="classOpenMS_1_1MSSpectrum.html#a4895afe86c2aa0747ae0411c58c82114">PeakSpectrum::ConstIterator</a>&#160;</td>
 
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          <td class="paramtype"><a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt; <a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>, <a class="el" href="structOpenMS_1_1CompNovoIonScoringBase_1_1IonScore.html">IonScore</a> &gt; &amp;&#160;</td>
 
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          <td class="paramname"><em>CID_nodes</em>, </td>
 
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          <td class="paramname"><em>charge</em> = <code>1</code>&#160;</td>
 
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          <td class="memname">virtual void scoreWitnessSet_ </td>
 
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          <td>(</td>
 
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          <td class="paramtype"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>&#160;</td>
 
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          <td class="paramtype">const <a class="el" href="group__Kernel.html#ga3ba16951dc40c7a6c7457f3452e096ab">PeakSpectrum</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>CID_orig_spec</em>&#160;</td>
 
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<p>Implemented in <a class="el" href="classOpenMS_1_1CompNovoIonScoring.html#a65f40aea9f37b40b63c5c6b71251e9f9">CompNovoIonScoring</a>, and <a class="el" href="classOpenMS_1_1CompNovoIonScoringCID.html#a65f40aea9f37b40b63c5c6b71251e9f9">CompNovoIonScoringCID</a>.</p>
 
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          <td class="memname">void updateMembers_ </td>
 
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<p>update members method from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html" title="A base class for all classes handling default parameters. ">DefaultParamHandler</a> to update the members </p>
 
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<p>Reimplemented from <a class="el" href="classOpenMS_1_1DefaultParamHandler.html#a776f7572fc4f466e9527ca233471920d">DefaultParamHandler</a>.</p>
 
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<h2 class="groupheader">Member Data Documentation</h2>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a> fragment_mass_tolerance_</td>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1Map.html">Map</a>&lt;<a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>, std::vector&lt;<a class="el" href="group__Concept.html#gace75bfb1aba684e874dffee13738bd15">DoubleReal</a>&gt; &gt; isotope_distributions_</td>
 
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
 
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:25 using doxygen 1.8.5</font></TD>
 
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