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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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<HTML>
 
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<HEAD>
 
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<TITLE>SemanticValidator.h Source File</TITLE>
 
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<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
 
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<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
 
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</HEAD>
 
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<BODY BGCOLOR="#FFFFFF">
 
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<A href="index.html">Home</A> &nbsp;&middot;
 
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<A href="classes.html">Classes</A> &nbsp;&middot;
 
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<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
 
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<A href="modules.html">Modules</A> &nbsp;&middot;
 
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<A href="functions_func.html">Members</A> &nbsp;&middot;
 
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<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
 
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<A href="pages.html">Related Pages</A>
 
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
 
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<!-- Generated by Doxygen 1.8.5 -->
 
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<div id="nav-path" class="navpath">
 
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  <ul>
 
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<li class="navelem"><a class="el" href="dir_e770f0cf77e550adde3f44739ef529fe.html">include</a></li><li class="navelem"><a class="el" href="dir_6a63c4937d4da007e55fff5dcf71e0f8.html">OpenMS</a></li><li class="navelem"><a class="el" href="dir_d1695c75ee0aa48d87e52f45c7decd7a.html">FORMAT</a></li><li class="navelem"><a class="el" href="dir_ad592ab6672f87b2d1e4f01597716ee7.html">VALIDATORS</a></li>  </ul>
 
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</div>
 
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</div><!-- top -->
 
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<div class="header">
 
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  <div class="headertitle">
 
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<div class="title">SemanticValidator.h</div>  </div>
 
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</div><!--header-->
 
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<div class="contents">
 
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<a href="SemanticValidator_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
 
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<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment">//                   OpenMS -- Open-Source Mass Spectrometry</span></div>
 
29
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
 
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<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
 
31
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
 
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<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">//</span></div>
 
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<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment">// This software is released under a three-clause BSD license:</span></div>
 
34
<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment">//  * Redistributions of source code must retain the above copyright</span></div>
 
35
<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment">//    notice, this list of conditions and the following disclaimer.</span></div>
 
36
<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment">//  * Redistributions in binary form must reproduce the above copyright</span></div>
 
37
<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment">//    notice, this list of conditions and the following disclaimer in the</span></div>
 
38
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">//    documentation and/or other materials provided with the distribution.</span></div>
 
39
<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">//  * Neither the name of any author or any participating institution</span></div>
 
40
<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment">//    may be used to endorse or promote products derived from this software</span></div>
 
41
<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">//    without specific prior written permission.</span></div>
 
42
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment">// For a full list of authors, refer to the file AUTHORS.</span></div>
 
43
<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
 
44
<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment">// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS &quot;AS IS&quot;</span></div>
 
45
<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span></div>
 
46
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment">// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE</span></div>
 
47
<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="comment">// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING</span></div>
 
48
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment">// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,</span></div>
 
49
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="comment">// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,</span></div>
 
50
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="comment">// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;</span></div>
 
51
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="comment">// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,</span></div>
 
52
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;<span class="comment">// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR</span></div>
 
53
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="comment">// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF</span></div>
 
54
<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="comment">// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.</span></div>
 
55
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;<span class="comment">//</span></div>
 
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<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
 
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<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="comment">// $Maintainer: Andreas Bertsch $</span></div>
 
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<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="comment">// $Authors: Marc Sturm, Andreas Bertsch $</span></div>
 
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<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="comment">// --------------------------------------------------------------------------</span></div>
 
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<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;</div>
 
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<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#ifndef OPENMS_FORMAT_VALIDATORS_SEMANTICVALIDATOR_H</span></div>
 
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<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor"></span><span class="preprocessor">#define OPENMS_FORMAT_VALIDATORS_SEMANTICVALIDATOR_H</span></div>
 
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<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor"></span></div>
 
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<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="XMLFile_8h.html">OpenMS/FORMAT/XMLFile.h</a>&gt;</span></div>
 
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<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="XMLHandler_8h.html">OpenMS/FORMAT/HANDLERS/XMLHandler.h</a>&gt;</span></div>
 
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<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="Map_8h.html">OpenMS/DATASTRUCTURES/Map.h</a>&gt;</span></div>
 
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<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="CVMappings_8h.html">OpenMS/DATASTRUCTURES/CVMappings.h</a>&gt;</span></div>
 
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<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;</div>
 
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<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;</div>
 
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<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;<span class="keyword">namespace </span>OpenMS</div>
 
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<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;{</div>
 
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<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;  <span class="keyword">class </span>ControlledVocabulary;</div>
 
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<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;  <span class="keyword">namespace </span>Internal</div>
 
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<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;  {</div>
 
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<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;</div>
 
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<div class="line"><a name="l00056"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">   56</a></span>&#160;    <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a> :</div>
 
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<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;      <span class="keyword">protected</span> <a class="code" href="classOpenMS_1_1Internal_1_1XMLHandler.html">Internal::XMLHandler</a>,</div>
 
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<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;      <span class="keyword">public</span> <a class="code" href="classOpenMS_1_1Internal_1_1XMLFile.html">Internal::XMLFile</a></div>
 
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<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;    {</div>
 
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<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;<span class="keyword">public</span>:</div>
 
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<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;      <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1CVMappings.html">CVMappings</a> &amp; mapping, <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1ControlledVocabulary.html">ControlledVocabulary</a> &amp; cv);</div>
 
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<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;</div>
 
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<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;      <span class="keyword">virtual</span> ~<a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a>();</div>
 
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<div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;</div>
 
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<div class="line"><a name="l00073"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">   73</a></span>&#160;      <span class="keyword">struct </span><a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">CVTerm</a></div>
 
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<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;      {</div>
 
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<div class="line"><a name="l00075"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#aa4b705e9e4267f64630cacd7fc55fc5d">   75</a></span>&#160;        <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#aa4b705e9e4267f64630cacd7fc55fc5d">accession</a>;</div>
 
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<div class="line"><a name="l00076"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9a2326f35466e54c36c070829245c557">   76</a></span>&#160;        <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9a2326f35466e54c36c070829245c557">name</a>;</div>
 
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<div class="line"><a name="l00077"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a32147dacf0dd0bda3c39144c67347bf3">   77</a></span>&#160;        <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a32147dacf0dd0bda3c39144c67347bf3">value</a>;</div>
 
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<div class="line"><a name="l00078"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9dfa744f0c79dc3f439d054cc3878eaa">   78</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9dfa744f0c79dc3f439d054cc3878eaa">has_value</a>;</div>
 
91
<div class="line"><a name="l00079"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6d07a35e88f53d1b49ddc99f84163312">   79</a></span>&#160;        <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6d07a35e88f53d1b49ddc99f84163312">unit_accession</a>;</div>
 
92
<div class="line"><a name="l00080"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#ad25f6dba1bbd00a3122302d7bac4beb5">   80</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#ad25f6dba1bbd00a3122302d7bac4beb5">has_unit_accession</a>;</div>
 
93
<div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a0f177f0eb91770b655d448ed8b9f4442">   81</a></span>&#160;        <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a0f177f0eb91770b655d448ed8b9f4442">unit_name</a>;</div>
 
94
<div class="line"><a name="l00082"></a><span class="lineno"><a class="line" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6f8965f74e78f28d247f2027d1089d13">   82</a></span>&#160;        <span class="keywordtype">bool</span> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6f8965f74e78f28d247f2027d1089d13">has_unit_name</a>;</div>
 
95
<div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;      };</div>
 
96
<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;</div>
 
97
<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;      <span class="keywordtype">bool</span> <a class="code" href="namespaceOpenMS_1_1Internal_1_1ClassTest.html#a3c6b858e43d6f3f6dab174e1ae3a99bf">validate</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; filename, <a class="code" href="classOpenMS_1_1StringList.html">StringList</a> &amp; errors, <a class="code" href="classOpenMS_1_1StringList.html">StringList</a> &amp; warnings);</div>
 
98
<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;</div>
 
99
<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;      <span class="keywordtype">bool</span> locateTerm(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; path, <span class="keyword">const</span> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">CVTerm</a> &amp; parsed_term) <span class="keyword">const</span>;</div>
 
100
<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;</div>
 
101
<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;      <span class="keywordtype">void</span> setTag(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; tag);</div>
 
102
<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;</div>
 
103
<div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;      <span class="keywordtype">void</span> setAccessionAttribute(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; accession);</div>
 
104
<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;</div>
 
105
<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;      <span class="keywordtype">void</span> setNameAttribute(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; name);</div>
 
106
<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;</div>
 
107
<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;      <span class="keywordtype">void</span> setValueAttribute(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; value);</div>
 
108
<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;</div>
 
109
<div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;      <span class="keywordtype">void</span> setCheckTermValueTypes(<span class="keywordtype">bool</span> check);</div>
 
110
<div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;</div>
 
111
<div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;      <span class="keywordtype">void</span> setCheckUnits(<span class="keywordtype">bool</span> check);</div>
 
112
<div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;</div>
 
113
<div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;      <span class="keywordtype">void</span> setUnitAccessionAttribute(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; accession);</div>
 
114
<div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;</div>
 
115
<div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;      <span class="keywordtype">void</span> setUnitNameAttribute(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; name);</div>
 
116
<div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;</div>
 
117
<div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;<span class="keyword">protected</span>:</div>
 
118
<div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;</div>
 
119
<div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;      <span class="comment">// Docu in base class</span></div>
 
120
<div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;      <span class="keywordtype">void</span> startElement(<span class="keyword">const</span> XMLCh * <span class="keyword">const</span> <span class="comment">/*uri*/</span>, <span class="keyword">const</span> XMLCh * <span class="keyword">const</span> <span class="comment">/*local_name*/</span>, <span class="keyword">const</span> XMLCh * <span class="keyword">const</span> qname, <span class="keyword">const</span> xercesc::Attributes &amp; attributes);</div>
 
121
<div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;</div>
 
122
<div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;      <span class="comment">// Docu in base class</span></div>
 
123
<div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;      <span class="keywordtype">void</span> endElement(<span class="keyword">const</span> XMLCh * <span class="keyword">const</span> <span class="comment">/*uri*/</span>, <span class="keyword">const</span> XMLCh * <span class="keyword">const</span> <span class="comment">/*local_name*/</span>, <span class="keyword">const</span> XMLCh * <span class="keyword">const</span> qname);</div>
 
124
<div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160;</div>
 
125
<div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;      <span class="comment">// Docu in base class</span></div>
 
126
<div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;      <span class="keywordtype">void</span> characters(<span class="keyword">const</span> XMLCh * <span class="keyword">const</span> chars, <span class="keyword">const</span> XMLSize_t <span class="comment">/*length*/</span>);</div>
 
127
<div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;</div>
 
128
<div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;      <span class="keyword">virtual</span> <a class="code" href="classOpenMS_1_1String.html">String</a> getPath_(<a class="code" href="classunsigned_01int.html">UInt</a> remove_from_end = 0) <span class="keyword">const</span>;</div>
 
129
<div class="line"><a name="l00151"></a><span class="lineno">  151</span>&#160;</div>
 
130
<div class="line"><a name="l00153"></a><span class="lineno">  153</span>&#160;      <span class="keyword">virtual</span> <span class="keywordtype">void</span> getCVTerm_(<span class="keyword">const</span> xercesc::Attributes &amp; attributes, <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">CVTerm</a> &amp; parsed_term);</div>
 
131
<div class="line"><a name="l00154"></a><span class="lineno">  154</span>&#160;</div>
 
132
<div class="line"><a name="l00155"></a><span class="lineno">  155</span>&#160;      <span class="comment">//~ forward dekl. of a inner struct/class not possible in C++ - or our Library is overtemplated</span></div>
 
133
<div class="line"><a name="l00156"></a><span class="lineno">  156</span>&#160;      <span class="comment">//~ /// make a SemanticValidator::CVTerm from a ControlledVocabulary::CVTerm (without any value or unit), needed for writing only cvs at the right places in the xml (i.e. with cvmapping)</span></div>
 
134
<div class="line"><a name="l00157"></a><span class="lineno">  157</span>&#160;      <span class="comment">//~ virtual void makeCVTerm_(const ControlledVocabulary::CVTerm &amp; lc, CVTerm &amp; parsed_term);</span></div>
 
135
<div class="line"><a name="l00158"></a><span class="lineno">  158</span>&#160;</div>
 
136
<div class="line"><a name="l00160"></a><span class="lineno">  160</span>&#160;      <span class="keyword">virtual</span> <span class="keywordtype">void</span> handleTerm_(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1String.html">String</a> &amp; path, <span class="keyword">const</span> <a class="code" href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">CVTerm</a> &amp; parsed_term);</div>
 
137
<div class="line"><a name="l00161"></a><span class="lineno">  161</span>&#160;</div>
 
138
<div class="line"><a name="l00163"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae7279f2237069dd49c0df9b4bd2b25c9">  163</a></span>&#160;      <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1CVMappings.html">CVMappings</a> &amp; <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae7279f2237069dd49c0df9b4bd2b25c9">mapping_</a>;</div>
 
139
<div class="line"><a name="l00164"></a><span class="lineno">  164</span>&#160;</div>
 
140
<div class="line"><a name="l00166"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a30eef55688f377cb3c01495cde711c27">  166</a></span>&#160;      <span class="keyword">const</span> <a class="code" href="classOpenMS_1_1ControlledVocabulary.html">ControlledVocabulary</a> &amp; <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a30eef55688f377cb3c01495cde711c27">cv_</a>;</div>
 
141
<div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;</div>
 
142
<div class="line"><a name="l00169"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a821f1ef452461104f7421c58e9791416">  169</a></span>&#160;      <a class="code" href="classOpenMS_1_1StringList.html">StringList</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a821f1ef452461104f7421c58e9791416">errors_</a>;</div>
 
143
<div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;</div>
 
144
<div class="line"><a name="l00172"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a72b382d48e274e5f6b77b712abcd5c54">  172</a></span>&#160;      <a class="code" href="classOpenMS_1_1StringList.html">StringList</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a72b382d48e274e5f6b77b712abcd5c54">warnings_</a>;</div>
 
145
<div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;</div>
 
146
<div class="line"><a name="l00175"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a944ed3ae884f2bbba2dabd0d7b0efc7e">  175</a></span>&#160;      <a class="code" href="classOpenMS_1_1StringList.html">StringList</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a944ed3ae884f2bbba2dabd0d7b0efc7e">open_tags_</a>;</div>
 
147
<div class="line"><a name="l00176"></a><span class="lineno">  176</span>&#160;</div>
 
148
<div class="line"><a name="l00178"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ad5846355df29e515d6215425a3ca81d1">  178</a></span>&#160;      <a class="code" href="classOpenMS_1_1Map.html">Map&lt;String, std::vector&lt;CVMappingRule&gt;</a> &gt; <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ad5846355df29e515d6215425a3ca81d1">rules_</a>;</div>
 
149
<div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160;</div>
 
150
<div class="line"><a name="l00183"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac4b09bd73cae1e65445f35e8531f5166">  183</a></span>&#160;      <a class="code" href="classOpenMS_1_1Map.html">Map&lt;String, Map&lt;String, Map&lt;String, UInt&gt;</a> &gt; &gt; <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac4b09bd73cae1e65445f35e8531f5166">fulfilled_</a>;</div>
 
151
<div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160;</div>
 
152
<div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160;</div>
 
153
<div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160;</div>
 
154
<div class="line"><a name="l00188"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a7fa0d42944828ddaa711823fb238bb8c">  188</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a7fa0d42944828ddaa711823fb238bb8c">cv_tag_</a>;</div>
 
155
<div class="line"><a name="l00189"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#aff629f3fbb7f6af52d59caed68ae5450">  189</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#aff629f3fbb7f6af52d59caed68ae5450">accession_att_</a>;</div>
 
156
<div class="line"><a name="l00190"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3196893f4e7aa79fd0da0519ed977c50">  190</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3196893f4e7aa79fd0da0519ed977c50">name_att_</a>;</div>
 
157
<div class="line"><a name="l00191"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae1af016f18ef3cf6cccdc8f2d86a926d">  191</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae1af016f18ef3cf6cccdc8f2d86a926d">value_att_</a>;</div>
 
158
<div class="line"><a name="l00192"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a5028692823cd0f018d69da369a1c02b7">  192</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a5028692823cd0f018d69da369a1c02b7">unit_accession_att_</a>;</div>
 
159
<div class="line"><a name="l00193"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3668e535877d2730090663229249a512">  193</a></span>&#160;      <a class="code" href="classOpenMS_1_1String.html">String</a> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3668e535877d2730090663229249a512">unit_name_att_</a>;</div>
 
160
<div class="line"><a name="l00194"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a055389951b2cc6d8dab74efb19dc8557">  194</a></span>&#160;      <span class="keywordtype">bool</span> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a055389951b2cc6d8dab74efb19dc8557">check_term_value_types_</a>;</div>
 
161
<div class="line"><a name="l00195"></a><span class="lineno"><a class="line" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac07cbf73c1838c8e45bcce73ebb8876f">  195</a></span>&#160;      <span class="keywordtype">bool</span> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac07cbf73c1838c8e45bcce73ebb8876f">check_units_</a>;</div>
 
162
<div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;</div>
 
163
<div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;<span class="keyword">private</span>:</div>
 
164
<div class="line"><a name="l00199"></a><span class="lineno">  199</span>&#160;</div>
 
165
<div class="line"><a name="l00201"></a><span class="lineno">  201</span>&#160;      <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a>();</div>
 
166
<div class="line"><a name="l00202"></a><span class="lineno">  202</span>&#160;</div>
 
167
<div class="line"><a name="l00204"></a><span class="lineno">  204</span>&#160;      <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a> &amp; rhs);</div>
 
168
<div class="line"><a name="l00205"></a><span class="lineno">  205</span>&#160;</div>
 
169
<div class="line"><a name="l00207"></a><span class="lineno">  207</span>&#160;      <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a> &amp; operator=(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1Internal_1_1SemanticValidator.html">SemanticValidator</a> &amp; rhs);</div>
 
170
<div class="line"><a name="l00208"></a><span class="lineno">  208</span>&#160;</div>
 
171
<div class="line"><a name="l00209"></a><span class="lineno">  209</span>&#160;    };</div>
 
172
<div class="line"><a name="l00210"></a><span class="lineno">  210</span>&#160;</div>
 
173
<div class="line"><a name="l00211"></a><span class="lineno">  211</span>&#160;  }   <span class="comment">// namespace Internal</span></div>
 
174
<div class="line"><a name="l00212"></a><span class="lineno">  212</span>&#160;</div>
 
175
<div class="line"><a name="l00213"></a><span class="lineno">  213</span>&#160;} <span class="comment">// namespace OpenMS</span></div>
 
176
<div class="line"><a name="l00214"></a><span class="lineno">  214</span>&#160;</div>
 
177
<div class="line"><a name="l00215"></a><span class="lineno">  215</span>&#160;<span class="preprocessor">#endif // OPENMS_FORMAT_VSLIDATORS_SEMANTICVALIDATOR_H</span></div>
 
178
<div class="ttc" id="classunsigned_01int_html"><div class="ttname"><a href="classunsigned_01int.html">unsigned int</a></div></div>
 
179
<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_aa4b705e9e4267f64630cacd7fc55fc5d"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#aa4b705e9e4267f64630cacd7fc55fc5d">OpenMS::Internal::SemanticValidator::CVTerm::accession</a></div><div class="ttdeci">String accession</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:75</div></div>
 
180
<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a0f177f0eb91770b655d448ed8b9f4442"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a0f177f0eb91770b655d448ed8b9f4442">OpenMS::Internal::SemanticValidator::CVTerm::unit_name</a></div><div class="ttdeci">String unit_name</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:81</div></div>
 
181
<div class="ttc" id="classOpenMS_1_1String_html"><div class="ttname"><a href="classOpenMS_1_1String.html">OpenMS::String</a></div><div class="ttdoc">A more convenient string class. </div><div class="ttdef"><b>Definition:</b> String.h:56</div></div>
 
182
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a30eef55688f377cb3c01495cde711c27"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a30eef55688f377cb3c01495cde711c27">OpenMS::Internal::SemanticValidator::cv_</a></div><div class="ttdeci">const ControlledVocabulary &amp; cv_</div><div class="ttdoc">Reference to the CVs. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:166</div></div>
 
183
<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a9dfa744f0c79dc3f439d054cc3878eaa"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9dfa744f0c79dc3f439d054cc3878eaa">OpenMS::Internal::SemanticValidator::CVTerm::has_value</a></div><div class="ttdeci">bool has_value</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:78</div></div>
 
184
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_ae1af016f18ef3cf6cccdc8f2d86a926d"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae1af016f18ef3cf6cccdc8f2d86a926d">OpenMS::Internal::SemanticValidator::value_att_</a></div><div class="ttdeci">String value_att_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:191</div></div>
 
185
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a821f1ef452461104f7421c58e9791416"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a821f1ef452461104f7421c58e9791416">OpenMS::Internal::SemanticValidator::errors_</a></div><div class="ttdeci">StringList errors_</div><div class="ttdoc">Validation erros. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:169</div></div>
 
186
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_ac07cbf73c1838c8e45bcce73ebb8876f"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac07cbf73c1838c8e45bcce73ebb8876f">OpenMS::Internal::SemanticValidator::check_units_</a></div><div class="ttdeci">bool check_units_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:195</div></div>
 
187
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a055389951b2cc6d8dab74efb19dc8557"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a055389951b2cc6d8dab74efb19dc8557">OpenMS::Internal::SemanticValidator::check_term_value_types_</a></div><div class="ttdeci">bool check_term_value_types_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:194</div></div>
 
188
<div class="ttc" id="Map_8h_html"><div class="ttname"><a href="Map_8h.html">Map.h</a></div></div>
 
189
<div class="ttc" id="classOpenMS_1_1Internal_1_1XMLHandler_html"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1XMLHandler.html">OpenMS::Internal::XMLHandler</a></div><div class="ttdoc">Base class for XML handlers. </div><div class="ttdef"><b>Definition:</b> XMLHandler.h:89</div></div>
 
190
<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a6d07a35e88f53d1b49ddc99f84163312"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6d07a35e88f53d1b49ddc99f84163312">OpenMS::Internal::SemanticValidator::CVTerm::unit_accession</a></div><div class="ttdeci">String unit_accession</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:79</div></div>
 
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<div class="ttc" id="classOpenMS_1_1ControlledVocabulary_html"><div class="ttname"><a href="classOpenMS_1_1ControlledVocabulary.html">OpenMS::ControlledVocabulary</a></div><div class="ttdoc">Representation of a controlled vocabulary. </div><div class="ttdef"><b>Definition:</b> ControlledVocabulary.h:54</div></div>
 
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<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_ad25f6dba1bbd00a3122302d7bac4beb5"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#ad25f6dba1bbd00a3122302d7bac4beb5">OpenMS::Internal::SemanticValidator::CVTerm::has_unit_accession</a></div><div class="ttdeci">bool has_unit_accession</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:80</div></div>
 
193
<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html">OpenMS::Internal::SemanticValidator::CVTerm</a></div><div class="ttdoc">Representation of a parsed CV term. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:73</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_aff629f3fbb7f6af52d59caed68ae5450"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#aff629f3fbb7f6af52d59caed68ae5450">OpenMS::Internal::SemanticValidator::accession_att_</a></div><div class="ttdeci">String accession_att_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:189</div></div>
 
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<div class="ttc" id="XMLFile_8h_html"><div class="ttname"><a href="XMLFile_8h.html">XMLFile.h</a></div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a3668e535877d2730090663229249a512"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3668e535877d2730090663229249a512">OpenMS::Internal::SemanticValidator::unit_name_att_</a></div><div class="ttdeci">String unit_name_att_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:193</div></div>
 
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<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a9a2326f35466e54c36c070829245c557"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a9a2326f35466e54c36c070829245c557">OpenMS::Internal::SemanticValidator::CVTerm::name</a></div><div class="ttdeci">String name</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:76</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a3196893f4e7aa79fd0da0519ed977c50"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a3196893f4e7aa79fd0da0519ed977c50">OpenMS::Internal::SemanticValidator::name_att_</a></div><div class="ttdeci">String name_att_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:190</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_ac4b09bd73cae1e65445f35e8531f5166"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ac4b09bd73cae1e65445f35e8531f5166">OpenMS::Internal::SemanticValidator::fulfilled_</a></div><div class="ttdeci">Map&lt; String, Map&lt; String, Map&lt; String, UInt &gt; &gt; &gt; fulfilled_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:183</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a7fa0d42944828ddaa711823fb238bb8c"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a7fa0d42944828ddaa711823fb238bb8c">OpenMS::Internal::SemanticValidator::cv_tag_</a></div><div class="ttdeci">String cv_tag_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:188</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_ae7279f2237069dd49c0df9b4bd2b25c9"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ae7279f2237069dd49c0df9b4bd2b25c9">OpenMS::Internal::SemanticValidator::mapping_</a></div><div class="ttdeci">const CVMappings &amp; mapping_</div><div class="ttdoc">Reference to the mappings. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:163</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a5028692823cd0f018d69da369a1c02b7"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a5028692823cd0f018d69da369a1c02b7">OpenMS::Internal::SemanticValidator::unit_accession_att_</a></div><div class="ttdeci">String unit_accession_att_</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:192</div></div>
 
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<div class="ttc" id="classOpenMS_1_1StringList_html"><div class="ttname"><a href="classOpenMS_1_1StringList.html">OpenMS::StringList</a></div><div class="ttdoc">String list. </div><div class="ttdef"><b>Definition:</b> StringList.h:56</div></div>
 
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<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a32147dacf0dd0bda3c39144c67347bf3"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a32147dacf0dd0bda3c39144c67347bf3">OpenMS::Internal::SemanticValidator::CVTerm::value</a></div><div class="ttdeci">String value</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:77</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_ad5846355df29e515d6215425a3ca81d1"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#ad5846355df29e515d6215425a3ca81d1">OpenMS::Internal::SemanticValidator::rules_</a></div><div class="ttdeci">Map&lt; String, std::vector&lt; CVMappingRule &gt; &gt; rules_</div><div class="ttdoc">Rules (location =&amp;gt; rule) </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:178</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1XMLFile_html"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1XMLFile.html">OpenMS::Internal::XMLFile</a></div><div class="ttdoc">Base class for loading/storing XML files that have a handler derived from XMLHandler. </div><div class="ttdef"><b>Definition:</b> XMLFile.h:51</div></div>
 
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<div class="ttc" id="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm_html_a6f8965f74e78f28d247f2027d1089d13"><div class="ttname"><a href="structOpenMS_1_1Internal_1_1SemanticValidator_1_1CVTerm.html#a6f8965f74e78f28d247f2027d1089d13">OpenMS::Internal::SemanticValidator::CVTerm::has_unit_name</a></div><div class="ttdeci">bool has_unit_name</div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:82</div></div>
 
208
<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html">OpenMS::Internal::SemanticValidator</a></div><div class="ttdoc">Semantically validates XML files using CVMappings and a ControlledVocabulary. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:56</div></div>
 
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<div class="ttc" id="classOpenMS_1_1CVMappings_html"><div class="ttname"><a href="classOpenMS_1_1CVMappings.html">OpenMS::CVMappings</a></div><div class="ttdoc">Representation of controlled vocabulary mapping rules (for PSI formats) </div><div class="ttdef"><b>Definition:</b> CVMappings.h:56</div></div>
 
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<div class="ttc" id="CVMappings_8h_html"><div class="ttname"><a href="CVMappings_8h.html">CVMappings.h</a></div></div>
 
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<div class="ttc" id="classOpenMS_1_1Map_html"><div class="ttname"><a href="classOpenMS_1_1Map.html">OpenMS::Map</a></div><div class="ttdoc">Map class based on the STL map (containing serveral convenience functions) </div><div class="ttdef"><b>Definition:</b> Map.h:50</div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a944ed3ae884f2bbba2dabd0d7b0efc7e"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a944ed3ae884f2bbba2dabd0d7b0efc7e">OpenMS::Internal::SemanticValidator::open_tags_</a></div><div class="ttdeci">StringList open_tags_</div><div class="ttdoc">List of open tags. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:175</div></div>
 
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<div class="ttc" id="namespaceOpenMS_1_1Internal_1_1ClassTest_html_a3c6b858e43d6f3f6dab174e1ae3a99bf"><div class="ttname"><a href="namespaceOpenMS_1_1Internal_1_1ClassTest.html#a3c6b858e43d6f3f6dab174e1ae3a99bf">OpenMS::Internal::ClassTest::validate</a></div><div class="ttdeci">bool validate(const std::vector&lt; std::string &gt; &amp;file_names)</div><div class="ttdoc">Validates the given files against the XML schema (if available) </div></div>
 
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<div class="ttc" id="XMLHandler_8h_html"><div class="ttname"><a href="XMLHandler_8h.html">XMLHandler.h</a></div></div>
 
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<div class="ttc" id="classOpenMS_1_1Internal_1_1SemanticValidator_html_a72b382d48e274e5f6b77b712abcd5c54"><div class="ttname"><a href="classOpenMS_1_1Internal_1_1SemanticValidator.html#a72b382d48e274e5f6b77b712abcd5c54">OpenMS::Internal::SemanticValidator::warnings_</a></div><div class="ttdeci">StringList warnings_</div><div class="ttdoc">Validation warnings. </div><div class="ttdef"><b>Definition:</b> SemanticValidator.h:172</div></div>
 
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
 
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:20 using doxygen 1.8.5</font></TD>
 
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