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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1LayerData.html">LayerData</a></li> </ul>
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<a href="#pub-methods">Public Member Functions</a> |
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<a href="#pub-attribs">Public Attributes</a> |
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<a href="classOpenMS_1_1LayerData-members.html">List of all members</a> </div>
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<div class="title">LayerData Class Reference<div class="ingroups"><a class="el" href="group__SpectrumWidgets.html">Spectrum visualizaion widgets</a></div></div> </div>
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<p>Class that stores the data for one layer.
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<a href="classOpenMS_1_1LayerData.html#details">More...</a></p>
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<p><code>#include <<a class="el" href="LayerData_8h_source.html">OpenMS/VISUAL/LayerData.h</a>></code></p>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:ab2417aa308a3c93111240aa99c19f41e"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ab2417aa308a3c93111240aa99c19f41e">LayerData</a> ()</td></tr>
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<tr class="memdesc:ab2417aa308a3c93111240aa99c19f41e"><td class="mdescLeft"> </td><td class="mdescRight">Default constructor. <a href="#ab2417aa308a3c93111240aa99c19f41e">More...</a><br/></td></tr>
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<tr class="separator:ab2417aa308a3c93111240aa99c19f41e"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:abcc5be607a462345e4f7bfe7c66849bc"><td class="memItemLeft" align="right" valign="top">const <br class="typebreak"/>
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<a class="el" href="classOpenMS_1_1MSExperiment.html#a066042ae14211da37d4fa66d466bfa3e">ExperimentType::SpectrumType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#abcc5be607a462345e4f7bfe7c66849bc">getCurrentSpectrum</a> () const </td></tr>
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<tr class="memdesc:abcc5be607a462345e4f7bfe7c66849bc"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the current spectrum (1d view) <a href="#abcc5be607a462345e4f7bfe7c66849bc">More...</a><br/></td></tr>
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<tr class="separator:abcc5be607a462345e4f7bfe7c66849bc"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a95d449298325e0072bfa7bc92048f4d9"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a95d449298325e0072bfa7bc92048f4d9">getFeatureMap</a> () const </td></tr>
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<tr class="memdesc:a95d449298325e0072bfa7bc92048f4d9"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the current feature data. <a href="#a95d449298325e0072bfa7bc92048f4d9">More...</a><br/></td></tr>
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<tr class="separator:a95d449298325e0072bfa7bc92048f4d9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a8545ca05ab5c44aa4c341230b76438bd"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a8545ca05ab5c44aa4c341230b76438bd">getFeatureMap</a> ()</td></tr>
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<tr class="memdesc:a8545ca05ab5c44aa4c341230b76438bd"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the current feature data. <a href="#a8545ca05ab5c44aa4c341230b76438bd">More...</a><br/></td></tr>
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<tr class="separator:a8545ca05ab5c44aa4c341230b76438bd"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a3adc9711df923c3e4ef9fb609963e0f1"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a3adc9711df923c3e4ef9fb609963e0f1">getConsensusMap</a> () const </td></tr>
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<tr class="memdesc:a3adc9711df923c3e4ef9fb609963e0f1"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the consensus feature data. <a href="#a3adc9711df923c3e4ef9fb609963e0f1">More...</a><br/></td></tr>
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<tr class="separator:a3adc9711df923c3e4ef9fb609963e0f1"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:acb4ebe1e597285706bc118bda303958f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#acb4ebe1e597285706bc118bda303958f">getConsensusMap</a> ()</td></tr>
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<tr class="memdesc:acb4ebe1e597285706bc118bda303958f"><td class="mdescLeft"> </td><td class="mdescRight">Returns current consensus map (mutable) <a href="#acb4ebe1e597285706bc118bda303958f">More...</a><br/></td></tr>
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<tr class="separator:acb4ebe1e597285706bc118bda303958f"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:abc09e7582792e5671258aaf6f04c492d"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#abc09e7582792e5671258aaf6f04c492d">getPeakData</a> () const </td></tr>
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<tr class="memdesc:abc09e7582792e5671258aaf6f04c492d"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the current peak data. <a href="#abc09e7582792e5671258aaf6f04c492d">More...</a><br/></td></tr>
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<tr class="separator:abc09e7582792e5671258aaf6f04c492d"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:acbae86675ec05e462a23f8ff560b2047"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#acbae86675ec05e462a23f8ff560b2047">getPeakData</a> ()</td></tr>
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<tr class="memdesc:acbae86675ec05e462a23f8ff560b2047"><td class="mdescLeft"> </td><td class="mdescRight">Returns a mutable reference to the current peak data. <a href="#acbae86675ec05e462a23f8ff560b2047">More...</a><br/></td></tr>
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<tr class="separator:acbae86675ec05e462a23f8ff560b2047"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a7173f32dd9be22aa12bf7ee1ffa3d6ef"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a7173f32dd9be22aa12bf7ee1ffa3d6ef">getChromatogramData</a> () const </td></tr>
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<tr class="memdesc:a7173f32dd9be22aa12bf7ee1ffa3d6ef"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the current chromatogram data. <a href="#a7173f32dd9be22aa12bf7ee1ffa3d6ef">More...</a><br/></td></tr>
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<tr class="separator:a7173f32dd9be22aa12bf7ee1ffa3d6ef"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a9cfdabc92ea7b1a1ebb81693c16367c5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a9cfdabc92ea7b1a1ebb81693c16367c5">getChromatogramData</a> ()</td></tr>
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<tr class="memdesc:a9cfdabc92ea7b1a1ebb81693c16367c5"><td class="mdescLeft"> </td><td class="mdescRight">Returns a mutable reference to the current chromatogram data. <a href="#a9cfdabc92ea7b1a1ebb81693c16367c5">More...</a><br/></td></tr>
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<tr class="separator:a9cfdabc92ea7b1a1ebb81693c16367c5"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a0aa1e478399d7f5a33256e38c854a0ee"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a0aa1e478399d7f5a33256e38c854a0ee">getCurrentAnnotations</a> () const </td></tr>
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<tr class="memdesc:a0aa1e478399d7f5a33256e38c854a0ee"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the annotations of the current spectrum (1d view) <a href="#a0aa1e478399d7f5a33256e38c854a0ee">More...</a><br/></td></tr>
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<tr class="separator:a0aa1e478399d7f5a33256e38c854a0ee"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ac6ceb9b8201493caf67784adab29692c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ac6ceb9b8201493caf67784adab29692c">getCurrentAnnotations</a> ()</td></tr>
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<tr class="memdesc:ac6ceb9b8201493caf67784adab29692c"><td class="mdescLeft"> </td><td class="mdescRight">Returns a mutable reference to the annotations of the current spectrum (1d view) <a href="#ac6ceb9b8201493caf67784adab29692c">More...</a><br/></td></tr>
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<tr class="separator:ac6ceb9b8201493caf67784adab29692c"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a6d100793fd59ee65094162a2c7ff6db9"><td class="memItemLeft" align="right" valign="top">const <a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a6d100793fd59ee65094162a2c7ff6db9">getAnnotations</a> (<a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> spectrum_index) const </td></tr>
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<tr class="memdesc:a6d100793fd59ee65094162a2c7ff6db9"><td class="mdescLeft"> </td><td class="mdescRight">Returns a const reference to the annotations of the current spectrum (1d view) <a href="#a6d100793fd59ee65094162a2c7ff6db9">More...</a><br/></td></tr>
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<tr class="separator:a6d100793fd59ee65094162a2c7ff6db9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:afbbfc0d6076c30ad2d3957327e449d50"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#afbbfc0d6076c30ad2d3957327e449d50">getAnnotations</a> (<a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> spectrum_index)</td></tr>
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<tr class="memdesc:afbbfc0d6076c30ad2d3957327e449d50"><td class="mdescLeft"> </td><td class="mdescRight">Returns a mutable reference to the annotations of the current spectrum (1d view) <a href="#afbbfc0d6076c30ad2d3957327e449d50">More...</a><br/></td></tr>
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<tr class="separator:afbbfc0d6076c30ad2d3957327e449d50"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a048269b86476545d0f93c3098cdf69b7"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1MSExperiment.html#a066042ae14211da37d4fa66d466bfa3e">ExperimentType::SpectrumType</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a048269b86476545d0f93c3098cdf69b7">getCurrentSpectrum</a> ()</td></tr>
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<tr class="memdesc:a048269b86476545d0f93c3098cdf69b7"><td class="mdescLeft"> </td><td class="mdescRight">Returns a mutable reference to the current spectrum (1d view) <a href="#a048269b86476545d0f93c3098cdf69b7">More...</a><br/></td></tr>
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<tr class="separator:a048269b86476545d0f93c3098cdf69b7"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a5230b2777ea2fb065a8a717400879dbb"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a5230b2777ea2fb065a8a717400879dbb">getCurrentSpectrumIndex</a> () const </td></tr>
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<tr class="memdesc:a5230b2777ea2fb065a8a717400879dbb"><td class="mdescLeft"> </td><td class="mdescRight">Get the index of the current spectrum. <a href="#a5230b2777ea2fb065a8a717400879dbb">More...</a><br/></td></tr>
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<tr class="separator:a5230b2777ea2fb065a8a717400879dbb"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a3aa08df4ab42dd84a60e9d3d570b0d24"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a3aa08df4ab42dd84a60e9d3d570b0d24">setCurrentSpectrumIndex</a> (<a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> index)</td></tr>
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<tr class="memdesc:a3aa08df4ab42dd84a60e9d3d570b0d24"><td class="mdescLeft"> </td><td class="mdescRight">Set the index of the current spectrum. <a href="#a3aa08df4ab42dd84a60e9d3d570b0d24">More...</a><br/></td></tr>
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<tr class="separator:a3aa08df4ab42dd84a60e9d3d570b0d24"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a94a7c3db089d482870983a4287e5bf25"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a94a7c3db089d482870983a4287e5bf25">chromatogram_flag_set</a> () const </td></tr>
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<tr class="memdesc:a94a7c3db089d482870983a4287e5bf25"><td class="mdescLeft"> </td><td class="mdescRight">Check whether the current layer is a chromatogram. <a href="#a94a7c3db089d482870983a4287e5bf25">More...</a><br/></td></tr>
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<tr class="separator:a94a7c3db089d482870983a4287e5bf25"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a43f92585590faa785495d78c87c98a68"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a43f92585590faa785495d78c87c98a68">set_chromatogram_flag</a> ()</td></tr>
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<tr class="memitem:a035f9e50aaf2c35bdbe956206286b289"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a035f9e50aaf2c35bdbe956206286b289">remove_chromatogram_flag</a> ()</td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-attribs"></a>
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Public Attributes</h2></td></tr>
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<tr class="memitem:aa54a57ae048476d840caf6d4d2c47aa3"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#aa54a57ae048476d840caf6d4d2c47aa3">visible</a></td></tr>
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<tr class="memdesc:aa54a57ae048476d840caf6d4d2c47aa3"><td class="mdescLeft"> </td><td class="mdescRight">if this layer is visible <a href="#aa54a57ae048476d840caf6d4d2c47aa3">More...</a><br/></td></tr>
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<tr class="separator:aa54a57ae048476d840caf6d4d2c47aa3"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:afad0f359fd4d0fafd6cc51d58dc53ba6"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#afad0f359fd4d0fafd6cc51d58dc53ba6">flipped</a></td></tr>
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<tr class="memdesc:afad0f359fd4d0fafd6cc51d58dc53ba6"><td class="mdescLeft"> </td><td class="mdescRight">if this layer is flipped (1d mirror view) <a href="#afad0f359fd4d0fafd6cc51d58dc53ba6">More...</a><br/></td></tr>
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<tr class="separator:afad0f359fd4d0fafd6cc51d58dc53ba6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ac52af21f72e9a83ef5e2e7076bae30e4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6">DataType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ac52af21f72e9a83ef5e2e7076bae30e4">type</a></td></tr>
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<tr class="memdesc:ac52af21f72e9a83ef5e2e7076bae30e4"><td class="mdescLeft"> </td><td class="mdescRight">data type (peak or feature data) <a href="#ac52af21f72e9a83ef5e2e7076bae30e4">More...</a><br/></td></tr>
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<tr class="separator:ac52af21f72e9a83ef5e2e7076bae30e4"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a9a2326f35466e54c36c070829245c557"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a9a2326f35466e54c36c070829245c557">name</a></td></tr>
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<tr class="memdesc:a9a2326f35466e54c36c070829245c557"><td class="mdescLeft"> </td><td class="mdescRight">layer name <a href="#a9a2326f35466e54c36c070829245c557">More...</a><br/></td></tr>
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<tr class="memitem:ae59f2daabb9fbadf96ab4fceb44d6f77"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1String.html">String</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ae59f2daabb9fbadf96ab4fceb44d6f77">filename</a></td></tr>
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<tr class="memdesc:ae59f2daabb9fbadf96ab4fceb44d6f77"><td class="mdescLeft"> </td><td class="mdescRight">file name of the file the data comes from (if available) <a href="#ae59f2daabb9fbadf96ab4fceb44d6f77">More...</a><br/></td></tr>
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<tr class="separator:ae59f2daabb9fbadf96ab4fceb44d6f77"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a445a60c263ff4a041acf8d094274b52b"><td class="memItemLeft" align="right" valign="top">std::vector<br class="typebreak"/>
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< <a class="el" href="classOpenMS_1_1PeptideIdentification.html">PeptideIdentification</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a445a60c263ff4a041acf8d094274b52b">peptides</a></td></tr>
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<tr class="memdesc:a445a60c263ff4a041acf8d094274b52b"><td class="mdescLeft"> </td><td class="mdescRight">peptide identifications <a href="#a445a60c263ff4a041acf8d094274b52b">More...</a><br/></td></tr>
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<tr class="separator:a445a60c263ff4a041acf8d094274b52b"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ad754716e5ea05dfffa1e048774643960"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Param.html">Param</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ad754716e5ea05dfffa1e048774643960">param</a></td></tr>
122
<tr class="memdesc:ad754716e5ea05dfffa1e048774643960"><td class="mdescLeft"> </td><td class="mdescRight">Layer parameters. <a href="#ad754716e5ea05dfffa1e048774643960">More...</a><br/></td></tr>
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<tr class="separator:ad754716e5ea05dfffa1e048774643960"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ad5629f5ee1855a5859c05d052207f5f3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1MultiGradient.html">MultiGradient</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ad5629f5ee1855a5859c05d052207f5f3">gradient</a></td></tr>
125
<tr class="memdesc:ad5629f5ee1855a5859c05d052207f5f3"><td class="mdescLeft"> </td><td class="mdescRight"><a class="el" href="classOpenMS_1_1Gradient.html" title="Representation of a HPLC gradient. ">Gradient</a> for 2D and 3D views. <a href="#ad5629f5ee1855a5859c05d052207f5f3">More...</a><br/></td></tr>
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<tr class="separator:ad5629f5ee1855a5859c05d052207f5f3"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a62e4fa80ed1cbf7e01e3b8d95acb89e3"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1DataFilters.html">DataFilters</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a62e4fa80ed1cbf7e01e3b8d95acb89e3">filters</a></td></tr>
128
<tr class="memdesc:a62e4fa80ed1cbf7e01e3b8d95acb89e3"><td class="mdescLeft"> </td><td class="mdescRight">Filters to apply before painting. <a href="#a62e4fa80ed1cbf7e01e3b8d95acb89e3">More...</a><br/></td></tr>
129
<tr class="separator:a62e4fa80ed1cbf7e01e3b8d95acb89e3"><td class="memSeparator" colspan="2"> </td></tr>
130
<tr class="memitem:a447a67f27af372b2cb68cc0cf64186e9"><td class="memItemLeft" align="right" valign="top">std::vector<br class="typebreak"/>
131
< <a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">annotations_1d</a></td></tr>
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<tr class="memdesc:a447a67f27af372b2cb68cc0cf64186e9"><td class="mdescLeft"> </td><td class="mdescRight">Annotations of all spectra of the experiment (1D view) <a href="#a447a67f27af372b2cb68cc0cf64186e9">More...</a><br/></td></tr>
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<tr class="separator:a447a67f27af372b2cb68cc0cf64186e9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a883ae210392142bdc0c07032eb0fc0d4"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a883ae210392142bdc0c07032eb0fc0d4">modifiable</a></td></tr>
135
<tr class="memdesc:a883ae210392142bdc0c07032eb0fc0d4"><td class="mdescLeft"> </td><td class="mdescRight">Flag that indicates if the layer data can be modified (so far used for features only) <a href="#a883ae210392142bdc0c07032eb0fc0d4">More...</a><br/></td></tr>
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<tr class="separator:a883ae210392142bdc0c07032eb0fc0d4"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a48b46e9dd96a6a268ee4e28d52a3ed87"><td class="memItemLeft" align="right" valign="top">bool </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a48b46e9dd96a6a268ee4e28d52a3ed87">modified</a></td></tr>
138
<tr class="memdesc:a48b46e9dd96a6a268ee4e28d52a3ed87"><td class="mdescLeft"> </td><td class="mdescRight">Flag that indicates that the layer data was modified since loading it. <a href="#a48b46e9dd96a6a268ee4e28d52a3ed87">More...</a><br/></td></tr>
139
<tr class="separator:a48b46e9dd96a6a268ee4e28d52a3ed87"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:abfe1e0a71c43307a45599b4769e1a956"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9">LabelType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#abfe1e0a71c43307a45599b4769e1a956">label</a></td></tr>
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<tr class="memdesc:abfe1e0a71c43307a45599b4769e1a956"><td class="mdescLeft"> </td><td class="mdescRight">Label type. <a href="#abfe1e0a71c43307a45599b4769e1a956">More...</a><br/></td></tr>
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<tr class="separator:abfe1e0a71c43307a45599b4769e1a956"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-attribs"></a>
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Private Attributes</h2></td></tr>
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<tr class="memitem:a849095d07b9cfcffc5aaaa3590ceab9b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a849095d07b9cfcffc5aaaa3590ceab9b">features</a></td></tr>
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<tr class="memdesc:a849095d07b9cfcffc5aaaa3590ceab9b"><td class="mdescLeft"> </td><td class="mdescRight">feature data <a href="#a849095d07b9cfcffc5aaaa3590ceab9b">More...</a><br/></td></tr>
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<tr class="separator:a849095d07b9cfcffc5aaaa3590ceab9b"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a66a8c8e5a012a7f7a364be54be2a9897"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a66a8c8e5a012a7f7a364be54be2a9897">consensus</a></td></tr>
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<tr class="memdesc:a66a8c8e5a012a7f7a364be54be2a9897"><td class="mdescLeft"> </td><td class="mdescRight">consensus feature data <a href="#a66a8c8e5a012a7f7a364be54be2a9897">More...</a><br/></td></tr>
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<tr class="separator:a66a8c8e5a012a7f7a364be54be2a9897"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:ad37b5929f383962c7085ffd21bd37ad8"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ad37b5929f383962c7085ffd21bd37ad8">peaks</a></td></tr>
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<tr class="memdesc:ad37b5929f383962c7085ffd21bd37ad8"><td class="mdescLeft"> </td><td class="mdescRight">peak data <a href="#ad37b5929f383962c7085ffd21bd37ad8">More...</a><br/></td></tr>
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<tr class="separator:ad37b5929f383962c7085ffd21bd37ad8"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:acc0e1ed05520a0c334cc5bb3c567e5f2"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#acc0e1ed05520a0c334cc5bb3c567e5f2">chromatograms</a></td></tr>
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<tr class="memdesc:acc0e1ed05520a0c334cc5bb3c567e5f2"><td class="mdescLeft"> </td><td class="mdescRight">chromatogram data <a href="#acc0e1ed05520a0c334cc5bb3c567e5f2">More...</a><br/></td></tr>
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<tr class="separator:acc0e1ed05520a0c334cc5bb3c567e5f2"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:afe6623897f9f2ba65bf7958860cdb04e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">current_spectrum_</a></td></tr>
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<tr class="memdesc:afe6623897f9f2ba65bf7958860cdb04e"><td class="mdescLeft"> </td><td class="mdescRight">Index of the current spectrum. <a href="#afe6623897f9f2ba65bf7958860cdb04e">More...</a><br/></td></tr>
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<tr class="separator:afe6623897f9f2ba65bf7958860cdb04e"><td class="memSeparator" colspan="2"> </td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="member-group"></a>
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Type definitions</h2></td></tr>
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<tr class="memitem:ad8ed01ff3ff33333d8e19db4d2818bb6"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6">DataType</a> { <br/>
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  <a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6a51a4e25c4601807c1f347f02c6538834">DT_PEAK</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6a375bb226d9aad6fbe6022960f2a8f008">DT_FEATURE</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6a51dba0010db221991bce68b24892969c">DT_CONSENSUS</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6a55d2b1110fbdef885498d2dcb2711790">DT_CHROMATOGRAM</a>,
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  <a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6ae84aa6fad37956946c285f52c37bb304">DT_IDENT</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6aeed6ea354e53d7846af370fa5ac314f9">DT_UNKNOWN</a>
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<tr class="memdesc:ad8ed01ff3ff33333d8e19db4d2818bb6"><td class="mdescLeft"> </td><td class="mdescRight">Dataset types. <a href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6">More...</a><br/></td></tr>
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<tr class="separator:ad8ed01ff3ff33333d8e19db4d2818bb6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aa705cf7e79a21c2352b00ffe20cd295f"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295f">Flags</a> { <br/>
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  <a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa5116e99c737a6e7013719cb478693014">F_HULL</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fafc4e9942b014e3c67746b14e0fb29ef7">F_HULLS</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa889ea25a29b969d4408fd46d8b659c1e">F_UNASSIGNED</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fabde05ad32ec801963a96777027526030">P_PRECURSORS</a>,
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  <a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fae6b764e8463265f1bb084e0ff3666224">P_PROJECTIONS</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295faf29341d5e87edafe32ac4bd05f7ac8f4">C_ELEMENTS</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa107ebbc4aa8991cf4679e8fbdabee100">I_PEPTIDEMZ</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa7140842a4caf6cdcf85bdb8cbf9f5273">SIZE_OF_FLAGS</a>
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<tr class="memdesc:aa705cf7e79a21c2352b00ffe20cd295f"><td class="mdescLeft"> </td><td class="mdescRight">Flags that determine which information is shown. <a href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295f">More...</a><br/></td></tr>
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<tr class="separator:aa705cf7e79a21c2352b00ffe20cd295f"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a2e33fafe7cfaf59b814f1fca20bdd0b9"><td class="memItemLeft" align="right" valign="top">enum  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9">LabelType</a> { <br/>
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  <a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9a30691a3182bd03aa6414fb8e00e123f8">L_NONE</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9aea4c115963f513bb9823ebd1ebd2bea9">L_INDEX</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9aa0ebdc7e207d8f3e9ccda2e862ec399b">L_META_LABEL</a>,
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<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9a2bc9351bb816ab1387441339dc6ab595">L_ID</a>,
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  <a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9a0829a2b458a9f4a3a3af1a41ae348940">L_ID_ALL</a>,
197
<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9adaa0b5d69d0f5c795842d6d9118c0369">SIZE_OF_LABEL_TYPE</a>
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<tr class="memdesc:a2e33fafe7cfaf59b814f1fca20bdd0b9"><td class="mdescLeft"> </td><td class="mdescRight">Label used in visualization. <a href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9">More...</a><br/></td></tr>
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<tr class="separator:a2e33fafe7cfaf59b814f1fca20bdd0b9"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:add205a5ccc5c6579b1a3051b7cf8707c"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#add205a5ccc5c6579b1a3051b7cf8707c">FeatureMapType</a></td></tr>
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<tr class="memdesc:add205a5ccc5c6579b1a3051b7cf8707c"><td class="mdescLeft"> </td><td class="mdescRight">Features. <a href="#add205a5ccc5c6579b1a3051b7cf8707c">More...</a><br/></td></tr>
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<tr class="separator:add205a5ccc5c6579b1a3051b7cf8707c"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:af7f622f316bc14466000ee9230fba7b2"><td class="memItemLeft" align="right" valign="top">typedef boost::shared_ptr<br class="typebreak"/>
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< <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a><> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a></td></tr>
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<tr class="memdesc:af7f622f316bc14466000ee9230fba7b2"><td class="mdescLeft"> </td><td class="mdescRight">SharedPtr on feature map. <a href="#af7f622f316bc14466000ee9230fba7b2">More...</a><br/></td></tr>
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<tr class="separator:af7f622f316bc14466000ee9230fba7b2"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a5a94adc6acc9610a0a97444d0abc5ee5"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a5a94adc6acc9610a0a97444d0abc5ee5">ConsensusMapType</a></td></tr>
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<tr class="memdesc:a5a94adc6acc9610a0a97444d0abc5ee5"><td class="mdescLeft"> </td><td class="mdescRight">consensus features <a href="#a5a94adc6acc9610a0a97444d0abc5ee5">More...</a><br/></td></tr>
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<tr class="separator:a5a94adc6acc9610a0a97444d0abc5ee5"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a92a35eff69acaaa04fef5bba6bae9fc1"><td class="memItemLeft" align="right" valign="top">typedef boost::shared_ptr<br class="typebreak"/>
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< <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a></td></tr>
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<tr class="memdesc:a92a35eff69acaaa04fef5bba6bae9fc1"><td class="mdescLeft"> </td><td class="mdescRight">SharedPtr on consensus features. <a href="#a92a35eff69acaaa04fef5bba6bae9fc1">More...</a><br/></td></tr>
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<tr class="separator:a92a35eff69acaaa04fef5bba6bae9fc1"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a70477e67dc0f0614f20edb48028926f6"><td class="memItemLeft" align="right" valign="top">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a70477e67dc0f0614f20edb48028926f6">ExperimentType</a></td></tr>
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<tr class="memdesc:a70477e67dc0f0614f20edb48028926f6"><td class="mdescLeft"> </td><td class="mdescRight">Main data type (experiment) <a href="#a70477e67dc0f0614f20edb48028926f6">More...</a><br/></td></tr>
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<tr class="separator:a70477e67dc0f0614f20edb48028926f6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a040fdfd93b8da7d83618c0c76fc1d88e"><td class="memItemLeft" align="right" valign="top">typedef boost::shared_ptr<br class="typebreak"/>
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< <a class="el" href="classOpenMS_1_1LayerData.html#a70477e67dc0f0614f20edb48028926f6">ExperimentType</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a></td></tr>
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<tr class="memdesc:a040fdfd93b8da7d83618c0c76fc1d88e"><td class="mdescLeft"> </td><td class="mdescRight">SharedPtr on <a class="el" href="classOpenMS_1_1MSExperiment.html" title="Representation of a mass spectrometry experiment. ">MSExperiment</a>. <a href="#a040fdfd93b8da7d83618c0c76fc1d88e">More...</a><br/></td></tr>
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<tr class="separator:a040fdfd93b8da7d83618c0c76fc1d88e"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a885d0dcef524a89b4381bb0fa0e4bd9d"><td class="memItemLeft" align="right" valign="top">std::bitset< <a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa7140842a4caf6cdcf85bdb8cbf9f5273">SIZE_OF_FLAGS</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#a885d0dcef524a89b4381bb0fa0e4bd9d">flags</a></td></tr>
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<tr class="memdesc:a885d0dcef524a89b4381bb0fa0e4bd9d"><td class="mdescLeft"> </td><td class="mdescRight">Actual state of each flag. <a href="#a885d0dcef524a89b4381bb0fa0e4bd9d">More...</a><br/></td></tr>
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<tr class="separator:a885d0dcef524a89b4381bb0fa0e4bd9d"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:aac52216e255c32f872659e2a9a74bd75"><td class="memItemLeft" align="right" valign="top">static const std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LayerData.html#aac52216e255c32f872659e2a9a74bd75">NamesOfLabelType</a> [<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9adaa0b5d69d0f5c795842d6d9118c0369">SIZE_OF_LABEL_TYPE</a>]</td></tr>
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<tr class="memdesc:aac52216e255c32f872659e2a9a74bd75"><td class="mdescLeft"> </td><td class="mdescRight">Label names. <a href="#aac52216e255c32f872659e2a9a74bd75">More...</a><br/></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
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<div class="textblock"><p>Class that stores the data for one layer. </p>
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</div><h2 class="groupheader">Member Typedef Documentation</h2>
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<td class="memname">typedef boost::shared_ptr<<a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a>> <a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a></td>
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<p>SharedPtr on consensus features. </p>
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<td class="memname">typedef <a class="el" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> <a class="el" href="classOpenMS_1_1LayerData.html#a5a94adc6acc9610a0a97444d0abc5ee5">ConsensusMapType</a></td>
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<p>consensus features </p>
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<td class="memname">typedef boost::shared_ptr<<a class="el" href="classOpenMS_1_1LayerData.html#a70477e67dc0f0614f20edb48028926f6">ExperimentType</a>> <a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a></td>
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<p>SharedPtr on <a class="el" href="classOpenMS_1_1MSExperiment.html" title="Representation of a mass spectrometry experiment. ">MSExperiment</a>. </p>
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<td class="memname">typedef <a class="el" href="classOpenMS_1_1MSExperiment.html">MSExperiment</a> <a class="el" href="classOpenMS_1_1LayerData.html#a70477e67dc0f0614f20edb48028926f6">ExperimentType</a></td>
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<p>Main data type (experiment) </p>
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<td class="memname">typedef boost::shared_ptr<<a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a><> > <a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a></td>
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<p>SharedPtr on feature map. </p>
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<td class="memname">typedef <a class="el" href="classOpenMS_1_1FeatureMap.html">FeatureMap</a> <a class="el" href="classOpenMS_1_1LayerData.html#add205a5ccc5c6579b1a3051b7cf8707c">FeatureMapType</a></td>
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<h2 class="groupheader">Member Enumeration Documentation</h2>
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<td class="memname">enum <a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6">DataType</a></td>
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<p>Dataset types. </p>
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<table class="fieldtable">
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<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6a51a4e25c4601807c1f347f02c6538834"></a>DT_PEAK</em> </td><td class="fielddoc">
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<p>Spectrum profile or centroided data. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6a375bb226d9aad6fbe6022960f2a8f008"></a>DT_FEATURE</em> </td><td class="fielddoc">
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<p><a class="el" href="classOpenMS_1_1Feature.html" title="An LC-MS feature. ">Feature</a> data. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6a51dba0010db221991bce68b24892969c"></a>DT_CONSENSUS</em> </td><td class="fielddoc">
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<p>Consensus feature data. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6a55d2b1110fbdef885498d2dcb2711790"></a>DT_CHROMATOGRAM</em> </td><td class="fielddoc">
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<p>Chromatogram data. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6ae84aa6fad37956946c285f52c37bb304"></a>DT_IDENT</em> </td><td class="fielddoc">
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<p>Peptide identification data. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="ad8ed01ff3ff33333d8e19db4d2818bb6aeed6ea354e53d7846af370fa5ac314f9"></a>DT_UNKNOWN</em> </td><td class="fielddoc">
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<p>Undefined data type indicating an error. </p>
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<td class="memname">enum <a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295f">Flags</a></td>
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<p>Flags that determine which information is shown. </p>
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<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fa5116e99c737a6e7013719cb478693014"></a>F_HULL</em> </td><td class="fielddoc">
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<p>Features: Overall convex hull. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fafc4e9942b014e3c67746b14e0fb29ef7"></a>F_HULLS</em> </td><td class="fielddoc">
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<p>Features: Convex hulls of single mass traces. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fa889ea25a29b969d4408fd46d8b659c1e"></a>F_UNASSIGNED</em> </td><td class="fielddoc">
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<p>Features: Unassigned peptide hits. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fabde05ad32ec801963a96777027526030"></a>P_PRECURSORS</em> </td><td class="fielddoc">
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<p>Peaks: Mark precursor peaks of MS/MS scans. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fae6b764e8463265f1bb084e0ff3666224"></a>P_PROJECTIONS</em> </td><td class="fielddoc">
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<p>Peaks: Show projections. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295faf29341d5e87edafe32ac4bd05f7ac8f4"></a>C_ELEMENTS</em> </td><td class="fielddoc">
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<p>Consensus features: Show elements. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fa107ebbc4aa8991cf4679e8fbdabee100"></a>I_PEPTIDEMZ</em> </td><td class="fielddoc">
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<p>Identifications: m/z source. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="aa705cf7e79a21c2352b00ffe20cd295fa7140842a4caf6cdcf85bdb8cbf9f5273"></a>SIZE_OF_FLAGS</em> </td><td class="fielddoc">
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<td class="memname">enum <a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9">LabelType</a></td>
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<p>Label used in visualization. </p>
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<table class="fieldtable">
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<tr><th colspan="2">Enumerator</th></tr><tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9a30691a3182bd03aa6414fb8e00e123f8"></a>L_NONE</em> </td><td class="fielddoc">
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<p>No label is displayed. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9aea4c115963f513bb9823ebd1ebd2bea9"></a>L_INDEX</em> </td><td class="fielddoc">
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<p>The element number is used. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9aa0ebdc7e207d8f3e9ccda2e862ec399b"></a>L_META_LABEL</em> </td><td class="fielddoc">
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<p>The 'label' meta information is used. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9a2bc9351bb816ab1387441339dc6ab595"></a>L_ID</em> </td><td class="fielddoc">
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<p>The best peptide hit of the first identification run is used. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9a0829a2b458a9f4a3a3af1a41ae348940"></a>L_ID_ALL</em> </td><td class="fielddoc">
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<p>All peptide hits of the first identification run are used. </p>
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<tr><td class="fieldname"><em><a class="anchor" id="a2e33fafe7cfaf59b814f1fca20bdd0b9adaa0b5d69d0f5c795842d6d9118c0369"></a>SIZE_OF_LABEL_TYPE</em> </td><td class="fielddoc">
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<h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html">LayerData</a> </td>
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<td class="paramname"></td><td>)</td>
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<p>Default constructor. </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">LayerData::annotations_1d</a>.</p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<a class="anchor" id="a94a7c3db089d482870983a4287e5bf25"></a>
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<td class="memname">bool chromatogram_flag_set </td>
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<p>Check whether the current layer is a chromatogram. </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#abc09e7582792e5671258aaf6f04c492d">LayerData::getPeakData()</a>.</p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a035f9e50aaf2c35bdbe956206286b289">LayerData::remove_chromatogram_flag()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>.</p>
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<td class="memname">const <a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a>& getAnnotations </td>
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<td class="paramtype"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td>
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<td class="paramname"><em>spectrum_index</em></td><td>)</td>
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<p>Returns a const reference to the annotations of the current spectrum (1d view) </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">LayerData::annotations_1d</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a>& getAnnotations </td>
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<td class="paramtype"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td>
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<td class="paramname"><em>spectrum_index</em></td><td>)</td>
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<p>Returns a mutable reference to the annotations of the current spectrum (1d view) </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">LayerData::annotations_1d</a>.</p>
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<td class="memname">const <a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a>& getChromatogramData </td>
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<td class="paramname"></td><td>)</td>
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<p>Returns a const reference to the current chromatogram data. </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#acc0e1ed05520a0c334cc5bb3c567e5f2">LayerData::chromatograms</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a>& getChromatogramData </td>
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<td class="paramname"></td><td>)</td>
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<p>Returns a mutable reference to the current chromatogram data. </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#acc0e1ed05520a0c334cc5bb3c567e5f2">LayerData::chromatograms</a>.</p>
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<td class="memname">const <a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a>& getConsensusMap </td>
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<td class="paramname"></td><td>)</td>
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<p>Returns a const reference to the consensus feature data. </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a66a8c8e5a012a7f7a364be54be2a9897">LayerData::consensus</a>.</p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a998e79e7149ca4ef1ca8fa1625ffa250">TOPPViewBase::annotateWithID()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a26fb52355d1e3f483d9e9cf9d1cf6e25">TOPPViewBase::fileChanged_()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>.</p>
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<a class="anchor" id="acb4ebe1e597285706bc118bda303958f"></a>
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a>& getConsensusMap </td>
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<td class="paramname"></td><td>)</td>
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<p>Returns current consensus map (mutable) </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a66a8c8e5a012a7f7a364be54be2a9897">LayerData::consensus</a>.</p>
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<td class="memname">const <a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a>& getCurrentAnnotations </td>
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<p>Returns a const reference to the annotations of the current spectrum (1d view) </p>
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">LayerData::annotations_1d</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">LayerData::current_spectrum_</a>.</p>
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<td class="memname"><a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a>& getCurrentAnnotations </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a mutable reference to the annotations of the current spectrum (1d view) </p>
698
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a447a67f27af372b2cb68cc0cf64186e9">LayerData::annotations_1d</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">LayerData::current_spectrum_</a>.</p>
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<a class="anchor" id="abcc5be607a462345e4f7bfe7c66849bc"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">const <a class="el" href="classOpenMS_1_1MSExperiment.html#a066042ae14211da37d4fa66d466bfa3e">ExperimentType::SpectrumType</a>& getCurrentSpectrum </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<p>Returns a const reference to the current spectrum (1d view) </p>
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<a class="anchor" id="a048269b86476545d0f93c3098cdf69b7"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1MSExperiment.html#a066042ae14211da37d4fa66d466bfa3e">ExperimentType::SpectrumType</a>& getCurrentSpectrum </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a mutable reference to the current spectrum (1d view) </p>
742
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">LayerData::current_spectrum_</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#ad37b5929f383962c7085ffd21bd37ad8">LayerData::peaks</a>.</p>
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<a class="anchor" id="a5230b2777ea2fb065a8a717400879dbb"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getCurrentSpectrumIndex </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Get the index of the current spectrum. </p>
769
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">LayerData::current_spectrum_</a>.</p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>.</p>
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<a class="anchor" id="a95d449298325e0072bfa7bc92048f4d9"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">const <a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a>& getFeatureMap </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a const reference to the current feature data. </p>
798
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a849095d07b9cfcffc5aaaa3590ceab9b">LayerData::features</a>.</p>
800
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a998e79e7149ca4ef1ca8fa1625ffa250">TOPPViewBase::annotateWithID()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a26fb52355d1e3f483d9e9cf9d1cf6e25">TOPPViewBase::fileChanged_()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>.</p>
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<a class="anchor" id="a8545ca05ab5c44aa4c341230b76438bd"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a>& getFeatureMap </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a const reference to the current feature data. </p>
827
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a849095d07b9cfcffc5aaaa3590ceab9b">LayerData::features</a>.</p>
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<a class="anchor" id="abc09e7582792e5671258aaf6f04c492d"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">const <a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a>& getPeakData </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a const reference to the current peak data. </p>
854
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#ad37b5929f383962c7085ffd21bd37ad8">LayerData::peaks</a>.</p>
856
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#afe89e2ae7174e81f9dea2bbc9a94c43d">TOPPViewBase::addData()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a998e79e7149ca4ef1ca8fa1625ffa250">TOPPViewBase::annotateWithID()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a94a7c3db089d482870983a4287e5bf25">LayerData::chromatogram_flag_set()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a5e7c6c4f4757dcfc3f3527d5ee9d0436">TOPPViewBase::enhancedWorkspaceWindowChanged()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a26fb52355d1e3f483d9e9cf9d1cf6e25">TOPPViewBase::fileChanged_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3211f56dc8894ef34e65928cc7ffb21b">TOPPViewBase::layerZoomChanged()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a035f9e50aaf2c35bdbe956206286b289">LayerData::remove_chromatogram_flag()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a43f92585590faa785495d78c87c98a68">LayerData::set_chromatogram_flag()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a6abb761ac7b48849da419282e0665101">TOPPViewBase::showCurrentPeaksAs2D()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac0415c7eaab77c3de0f2ffac0640aa9e">TOPPViewBase::showCurrentPeaksAs3D()</a>.</p>
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<a class="anchor" id="acbae86675ec05e462a23f8ff560b2047"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a>& getPeakData </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Returns a mutable reference to the current peak data. </p>
883
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#ad37b5929f383962c7085ffd21bd37ad8">LayerData::peaks</a>.</p>
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<a class="anchor" id="a035f9e50aaf2c35bdbe956206286b289"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void remove_chromatogram_flag </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#a94a7c3db089d482870983a4287e5bf25">LayerData::chromatogram_flag_set()</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#abc09e7582792e5671258aaf6f04c492d">LayerData::getPeakData()</a>.</p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>.</p>
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<a class="anchor" id="a43f92585590faa785495d78c87c98a68"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void set_chromatogram_flag </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>References <a class="el" href="classOpenMS_1_1LayerData.html#abc09e7582792e5671258aaf6f04c492d">LayerData::getPeakData()</a>.</p>
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<a class="anchor" id="a3aa08df4ab42dd84a60e9d3d570b0d24"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void setCurrentSpectrumIndex </td>
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<td class="paramtype"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> </td>
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<td class="paramname"><em>index</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>Set the index of the current spectrum. </p>
963
<p>References <a class="el" href="classOpenMS_1_1LayerData.html#afe6623897f9f2ba65bf7958860cdb04e">LayerData::current_spectrum_</a>.</p>
967
<h2 class="groupheader">Member Data Documentation</h2>
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<a class="anchor" id="a447a67f27af372b2cb68cc0cf64186e9"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">std::vector<<a class="el" href="classOpenMS_1_1Annotations1DContainer.html">Annotations1DContainer</a>> annotations_1d</td>
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</div><div class="memdoc">
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<p>Annotations of all spectra of the experiment (1D view) </p>
980
<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a6d100793fd59ee65094162a2c7ff6db9">LayerData::getAnnotations()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a0aa1e478399d7f5a33256e38c854a0ee">LayerData::getCurrentAnnotations()</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#ab2417aa308a3c93111240aa99c19f41e">LayerData::LayerData()</a>.</p>
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<a class="anchor" id="acc0e1ed05520a0c334cc5bb3c567e5f2"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> chromatograms</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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</div><div class="memdoc">
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<p>chromatogram data </p>
1004
<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a7173f32dd9be22aa12bf7ee1ffa3d6ef">LayerData::getChromatogramData()</a>.</p>
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<a class="anchor" id="a66a8c8e5a012a7f7a364be54be2a9897"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a92a35eff69acaaa04fef5bba6bae9fc1">ConsensusMapSharedPtrType</a> consensus</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
1024
</div><div class="memdoc">
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<p>consensus feature data </p>
1028
<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a3adc9711df923c3e4ef9fb609963e0f1">LayerData::getConsensusMap()</a>.</p>
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<a class="anchor" id="afe6623897f9f2ba65bf7958860cdb04e"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> current_spectrum_</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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</div><div class="memdoc">
1050
<p>Index of the current spectrum. </p>
1052
<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a0aa1e478399d7f5a33256e38c854a0ee">LayerData::getCurrentAnnotations()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a048269b86476545d0f93c3098cdf69b7">LayerData::getCurrentSpectrum()</a>, <a class="el" href="classOpenMS_1_1LayerData.html#a5230b2777ea2fb065a8a717400879dbb">LayerData::getCurrentSpectrumIndex()</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#a3aa08df4ab42dd84a60e9d3d570b0d24">LayerData::setCurrentSpectrumIndex()</a>.</p>
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<a class="anchor" id="a849095d07b9cfcffc5aaaa3590ceab9b"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#af7f622f316bc14466000ee9230fba7b2">FeatureMapSharedPtrType</a> features</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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</div><div class="memdoc">
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<p>feature data </p>
1076
<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a95d449298325e0072bfa7bc92048f4d9">LayerData::getFeatureMap()</a>.</p>
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<a class="anchor" id="ae59f2daabb9fbadf96ab4fceb44d6f77"></a>
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<div class="memitem">
1082
<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> filename</td>
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</div><div class="memdoc">
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<p>file name of the file the data comes from (if available) </p>
1092
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a26fb52355d1e3f483d9e9cf9d1cf6e25">TOPPViewBase::fileChanged_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3e929631556d7d00bc5d03b810054cd6">TOPPViewBase::getFilenamesOfOpenFiles_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a6abb761ac7b48849da419282e0665101">TOPPViewBase::showCurrentPeaksAs2D()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac0415c7eaab77c3de0f2ffac0640aa9e">TOPPViewBase::showCurrentPeaksAs3D()</a>.</p>
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<a class="anchor" id="a62e4fa80ed1cbf7e01e3b8d95acb89e3"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1DataFilters.html">DataFilters</a> filters</td>
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</div><div class="memdoc">
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<p>Filters to apply before painting. </p>
1108
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a509251bb5d5ebf0bef2a89f8e2f8b8c8">TOPPViewBase::filterContextMenu()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ae93c0d4a78b7ecf8ad2152bc9f24ade9">TOPPViewBase::filterEdit()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a46f4a0365b4fd4bbfa59667d6dbc0e10">TOPPViewBase::updateFilterBar()</a>.</p>
1112
<a class="anchor" id="a885d0dcef524a89b4381bb0fa0e4bd9d"></a>
1113
<div class="memitem">
1114
<div class="memproto">
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<table class="memname">
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<td class="memname">std::bitset<<a class="el" href="classOpenMS_1_1LayerData.html#aa705cf7e79a21c2352b00ffe20cd295fa7140842a4caf6cdcf85bdb8cbf9f5273">SIZE_OF_FLAGS</a>> flags</td>
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</div><div class="memdoc">
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<p>Actual state of each flag. </p>
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<a class="anchor" id="afad0f359fd4d0fafd6cc51d58dc53ba6"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">bool flipped</td>
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</div><div class="memdoc">
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<p>if this layer is flipped (1d mirror view) </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a685efb0ef7ae9dd0931d0494cbe68337">TOPPViewBase::updateLayerBar()</a>.</p>
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<a class="anchor" id="ad5629f5ee1855a5859c05d052207f5f3"></a>
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<div class="memitem">
1144
<div class="memproto">
1145
<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1MultiGradient.html">MultiGradient</a> gradient</td>
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</div><div class="memdoc">
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<p><a class="el" href="classOpenMS_1_1Gradient.html" title="Representation of a HPLC gradient. ">Gradient</a> for 2D and 3D views. </p>
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<a class="anchor" id="abfe1e0a71c43307a45599b4769e1a956"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9">LabelType</a> label</td>
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</div><div class="memdoc">
1168
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3d36bfeded252dc33959e4f8815d468a">TOPPViewBase::updateToolBar()</a>.</p>
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<a class="anchor" id="a883ae210392142bdc0c07032eb0fc0d4"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">bool modifiable</td>
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</div><div class="memdoc">
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<p>Flag that indicates if the layer data can be modified (so far used for features only) </p>
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<a class="anchor" id="a48b46e9dd96a6a268ee4e28d52a3ed87"></a>
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<div class="memitem">
1188
<div class="memproto">
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<table class="memname">
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<td class="memname">bool modified</td>
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</div><div class="memdoc">
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<p>Flag that indicates that the layer data was modified since loading it. </p>
1198
<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a685efb0ef7ae9dd0931d0494cbe68337">TOPPViewBase::updateLayerBar()</a>.</p>
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<a class="anchor" id="a9a2326f35466e54c36c070829245c557"></a>
1203
<div class="memitem">
1204
<div class="memproto">
1205
<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1String.html">String</a> name</td>
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</div><div class="memdoc">
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#afe89e2ae7174e81f9dea2bbc9a94c43d">TOPPViewBase::addData()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a509251bb5d5ebf0bef2a89f8e2f8b8c8">TOPPViewBase::filterContextMenu()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#af1430f578fd4bb928bf153fead76262c">TOPPViewBase::layerContextMenu()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a6abb761ac7b48849da419282e0665101">TOPPViewBase::showCurrentPeaksAs2D()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac0415c7eaab77c3de0f2ffac0640aa9e">TOPPViewBase::showCurrentPeaksAs3D()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a685efb0ef7ae9dd0931d0494cbe68337">TOPPViewBase::updateLayerBar()</a>.</p>
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<a class="anchor" id="aac52216e255c32f872659e2a9a74bd75"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">const std::string NamesOfLabelType[<a class="el" href="classOpenMS_1_1LayerData.html#a2e33fafe7cfaf59b814f1fca20bdd0b9adaa0b5d69d0f5c795842d6d9118c0369">SIZE_OF_LABEL_TYPE</a>]</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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</div><div class="memdoc">
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<p>Label names. </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a50353dfbc139477f20cd766498e80e6f">TOPPViewBase::changeLabel()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a565c5faad2e89b819c32e1aa57cb615a">TOPPViewBase::TOPPViewBase()</a>.</p>
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<a class="anchor" id="ad754716e5ea05dfffa1e048774643960"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1Param.html">Param</a> param</td>
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</div><div class="memdoc">
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<p>Layer parameters. </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#af269aadf469e6fa54fe6e9d5aee430d9">TOPPViewBase::loadFiles()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a31716322f812328ebc5d2961d35d6370">TOPPViewBase::setIntensityMode()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a685efb0ef7ae9dd0931d0494cbe68337">TOPPViewBase::updateLayerBar()</a>.</p>
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<a class="anchor" id="ad37b5929f383962c7085ffd21bd37ad8"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#a040fdfd93b8da7d83618c0c76fc1d88e">ExperimentSharedPtrType</a> peaks</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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</div><div class="memdoc">
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<p>Referenced by <a class="el" href="classOpenMS_1_1LayerData.html#a048269b86476545d0f93c3098cdf69b7">LayerData::getCurrentSpectrum()</a>, and <a class="el" href="classOpenMS_1_1LayerData.html#abc09e7582792e5671258aaf6f04c492d">LayerData::getPeakData()</a>.</p>
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<a class="anchor" id="a445a60c263ff4a041acf8d094274b52b"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">std::vector<<a class="el" href="classOpenMS_1_1PeptideIdentification.html">PeptideIdentification</a>> peptides</td>
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</div><div class="memdoc">
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<p>peptide identifications </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>.</p>
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<a class="anchor" id="ac52af21f72e9a83ef5e2e7076bae30e4"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LayerData.html#ad8ed01ff3ff33333d8e19db4d2818bb6">DataType</a> type</td>
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</div><div class="memdoc">
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<p>data type (peak or feature data) </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#afe89e2ae7174e81f9dea2bbc9a94c43d">TOPPViewBase::addData()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a998e79e7149ca4ef1ca8fa1625ffa250">TOPPViewBase::annotateWithID()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a653cd298ceb9fc75783f7ecdf476fe39">TOPPViewBase::copyLayer()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a26fb52355d1e3f483d9e9cf9d1cf6e25">TOPPViewBase::fileChanged_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3211f56dc8894ef34e65928cc7ffb21b">TOPPViewBase::layerZoomChanged()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a923163eea1a103f7faaaa25b374e536a">TOPPViewBase::runTOPPTool_()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ac0415c7eaab77c3de0f2ffac0640aa9e">TOPPViewBase::showCurrentPeaksAs3D()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a3d36bfeded252dc33959e4f8815d468a">TOPPViewBase::updateToolBar()</a>.</p>
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<a class="anchor" id="aa54a57ae048476d840caf6d4d2c47aa3"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">bool visible</td>
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</div><div class="memdoc">
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<p>if this layer is visible </p>
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<p>Referenced by <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a998e79e7149ca4ef1ca8fa1625ffa250">TOPPViewBase::annotateWithID()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a10ef89c9b6d14467fda7f15310387ce2">TOPPViewBase::editMetadata()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#ae06376fcd97662f7e11750881c973152">TOPPViewBase::layerVisibilityChange()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a8eeb0a7d1e13951ed4ab96dbc3942f76">TOPPViewBase::rerunTOPPTool()</a>, <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a84ac8c59d495c96e543ed84e2b3cf66e">TOPPViewBase::showTOPPDialog_()</a>, and <a class="el" href="classOpenMS_1_1TOPPViewBase.html#a685efb0ef7ae9dd0931d0494cbe68337">TOPPViewBase::updateLayerBar()</a>.</p>
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</div><!-- contents -->
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
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<TABLE width="100%" border="0">
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:35 using doxygen 1.8.5</font></TD>
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