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Viewing changes to source/TEST/TOPP/PeptideIndexer_4_out.idXML

  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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source/TEST/TOPP/PeptideIndexer_4_out.idXML
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<?xml version="1.0" encoding="UTF-8"?>
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<?xml-stylesheet type="text/xsl" href="file:///C:/dev/OpenMS/share/OpenMS/XSL/IdXML.xsl"?>
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<IdXML version="1.2" xsi:noNamespaceSchemaLocation="http://open-ms.sourceforge.net/schemas/IdXML_1_2.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
 
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<?xml-stylesheet type="text/xsl" href="http://open-ms.sourceforge.net/XSL/IdXML.xsl" ?>
 
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<IdXML version="1.2" xsi:noNamespaceSchemaLocation="http://open-ms.sourceforge.net/SCHEMAS/IdXML_1_2.xsd" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
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        <SearchParameters id="SP_0" db="" db_version="" taxonomy="" mass_type="monoisotopic" charges="" enzyme="unknown_enzyme" missed_cleavages="0" precursor_peak_tolerance="0" peak_mass_tolerance="0" >
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        </SearchParameters>
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        <IdentificationRun date="2005-01-27T17:47:41" search_engine="" search_engine_version="" search_parameters_ref="SP_0" >
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                                <UserParam type="string" name="target_decoy" value="target"/>
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                                <UserParam type="string" name="protein_references" value="unique"/>
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                        </PeptideHit>
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                        <PeptideHit score="40" sequence="EDQSCPSERRRAFSRLRFGPS" charge="2" protein_refs="PH_2" >
 
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                        <PeptideHit score="40" sequence="EDQSC(Carboxymethyl)PSERRRAFSRLRFGPS" charge="2" protein_refs="PH_2" >
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                                <UserParam type="string" name="target_decoy" value="decoy"/>
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                                <UserParam type="string" name="protein_references" value="unique"/>
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                        </PeptideHit>
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                        <PeptideHit score="40" sequence="EWATYTCVLGFHVYVPVR" charge="2" protein_refs="PH_1 PH_3 PH_4" >
 
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                        <PeptideHit score="40" sequence="EWATYTC(Carboxymethyl)VLGFHVYVPVR" charge="2" protein_refs="PH_1 PH_3 PH_4" >
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                                <UserParam type="string" name="target_decoy" value="target+decoy"/>
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                                <UserParam type="string" name="protein_references" value="non-unique"/>
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                        </PeptideHit>
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                                <UserParam type="string" name="target_decoy" value="target+decoy"/>
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                                <UserParam type="string" name="protein_references" value="non-unique"/>
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                        </PeptideHit>
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                        <PeptideHit score="0.0001" sequence="UNMATCHED" charge="2" >
 
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                        <PeptideHit score="0.0001" sequence="UN(Deamidated)M(Oxidation)ATCHED" charge="2" >
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                                <UserParam type="string" name="target_decoy" value=""/>
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                                <UserParam type="string" name="protein_references" value="unmatched"/>
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                        </PeptideHit>
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                </PeptideIdentification>
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                <PeptideIdentification score_type="Mascot" higher_score_better="true" significance_threshold="31.8621" MZ="0" RT="0" >
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                        <PeptideHit score="0.0001" sequence="FIANGE" charge="2" protein_refs="PH_5" >
 
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                        <PeptideHit score="0.0001" sequence="FIAN(Deamidated)GE" charge="2" protein_refs="PH_5" >
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                                <UserParam type="string" name="target_decoy" value="decoy"/>
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                                <UserParam type="string" name="protein_references" value="unique"/>
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                        </PeptideHit>