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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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doc/html/PeptideIndexer_8C.html
 
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<HTML>
 
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<HEAD>
 
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<TITLE>PeptideIndexer.C File Reference</TITLE>
 
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<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
 
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</HEAD>
 
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<A href="index.html">Home</A> &nbsp;&middot;
 
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<A href="classes.html">Classes</A> &nbsp;&middot;
 
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<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
 
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<A href="modules.html">Modules</A> &nbsp;&middot;
 
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<A href="functions_func.html">Members</A> &nbsp;&middot;
 
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<li class="navelem"><a class="el" href="dir_758a5714d7139f0515656e76324a9d4c.html">source</a></li><li class="navelem"><a class="el" href="dir_cfd7f4bdbf6351ce4a5483b76a6195c0.html">APPLICATIONS</a></li><li class="navelem"><a class="el" href="dir_aaffc82e5c410ac06091589510398423.html">TOPP</a></li>  </ul>
 
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</div><!-- top -->
 
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<div class="header">
 
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  <div class="summary">
 
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<a href="#nested-classes">Classes</a> &#124;
 
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<a href="#namespaces">Namespaces</a> &#124;
 
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<a href="#func-members">Functions</a>  </div>
 
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  <div class="headertitle">
 
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<div class="title">PeptideIndexer.C File Reference</div>  </div>
 
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</div><!--header-->
 
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<div class="contents">
 
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<div class="textblock"><code>#include &lt;<a class="el" href="TOPPBase_8h_source.html">OpenMS/APPLICATIONS/TOPPBase.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="EnzymaticDigestion_8h_source.html">OpenMS/CHEMISTRY/EnzymaticDigestion.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="SeqanIncludeWrapper_8h_source.html">OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="IdXMLFile_8h_source.html">OpenMS/FORMAT/IdXMLFile.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="FASTAFile_8h_source.html">OpenMS/FORMAT/FASTAFile.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="ProteinIdentification_8h_source.html">OpenMS/METADATA/ProteinIdentification.h</a>&gt;</code><br/>
 
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<code>#include &lt;<a class="el" href="File_8h_source.html">OpenMS/SYSTEM/File.h</a>&gt;</code><br/>
 
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<code>#include &lt;algorithm&gt;</code><br/>
 
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</div><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
 
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Classes</h2></td></tr>
 
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1FoundProteinFunctor.html">FoundProteinFunctor</a></td></tr>
 
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<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1SAValue_3_01Index_3_01StringSet_3_01Peptide_01_4_00_01IndexWotd_3_4_01_4_01_4.html">SAValue&lt; Index&lt; StringSet&lt; Peptide &gt;, IndexWotd&lt;&gt; &gt; &gt;</a></td></tr>
 
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<tr class="separator:"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">struct &#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="structseqan_1_1EquivalenceClassAA__.html">EquivalenceClassAA_&lt; T &gt;</a></td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="namespaces"></a>
 
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Namespaces</h2></td></tr>
 
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<tr class="memitem:namespaceseqan"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="namespaceseqan.html">seqan</a></td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
 
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Functions</h2></td></tr>
 
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<tr class="memitem:a3edf155785de4517433ad049398fa418"><td class="memTemplParams" colspan="2">template&lt;bool enumerateA, bool enumerateB, typename TOnFoundFunctor , typename TTreeIteratorA , typename TIterPosA , typename TTreeIteratorB , typename TIterPosB , typename TErrors &gt; </td></tr>
 
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<tr class="memitem:a3edf155785de4517433ad049398fa418"><td class="memTemplItemLeft" align="right" valign="top">void&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceseqan.html#a3edf155785de4517433ad049398fa418">_approximateAminoAcidTreeSearch</a> (TOnFoundFunctor &amp;onFoundFunctor, TTreeIteratorA iterA, TIterPosA iterPosA, TTreeIteratorB iterB_, TIterPosB iterPosB, TErrors errorsLeft, TErrors classErrorsLeft)</td></tr>
 
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<tr class="separator:a3edf155785de4517433ad049398fa418"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a02b69f3c44d2505ee79ff1f3d491bbbb"><td class="memTemplParams" colspan="2">template&lt;typename TEquivalenceTable &gt; </td></tr>
 
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<tr class="memitem:a02b69f3c44d2505ee79ff1f3d491bbbb"><td class="memTemplItemLeft" align="right" valign="top">bool&#160;</td><td class="memTemplItemRight" valign="bottom"><a class="el" href="namespaceseqan.html#a02b69f3c44d2505ee79ff1f3d491bbbb">_charComparator</a> (AminoAcid charA, AminoAcid charB, TEquivalenceTable equivalence)</td></tr>
 
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<tr class="separator:a02b69f3c44d2505ee79ff1f3d491bbbb"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table>
 
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</div><!-- contents -->
 
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<TABLE width="100%" border="0">
 
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
 
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5</font></TD>
 
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