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  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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<HTML>
 
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<HEAD>
 
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<TITLE>FidHandler Class Reference</TITLE>
 
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<LINK HREF="doxygen.css" REL="stylesheet" TYPE="text/css">
 
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<LINK HREF="style_ini.css" REL="stylesheet" TYPE="text/css">
 
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</HEAD>
 
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<BODY BGCOLOR="#FFFFFF">
 
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<A href="index.html">Home</A> &nbsp;&middot;
 
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<A href="classes.html">Classes</A> &nbsp;&middot;
 
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<A href="annotated.html">Annotated Classes</A> &nbsp;&middot;
 
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<A href="modules.html">Modules</A> &nbsp;&middot;
 
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<A href="functions_func.html">Members</A> &nbsp;&middot;
 
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<A href="namespaces.html">Namespaces</A> &nbsp;&middot;
 
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<A href="pages.html">Related Pages</A>
 
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
 
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<!-- Generated by Doxygen 1.8.5 -->
 
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<div id="nav-path" class="navpath">
 
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  <ul>
 
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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="namespaceOpenMS_1_1Internal.html">Internal</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html">FidHandler</a></li>  </ul>
 
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</div>
 
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</div><!-- top -->
 
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<div class="header">
 
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  <div class="summary">
 
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<a href="#pub-methods">Public Member Functions</a> &#124;
 
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<a href="#pri-methods">Private Member Functions</a> &#124;
 
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<a href="#pri-attribs">Private Attributes</a> &#124;
 
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<a href="classOpenMS_1_1Internal_1_1FidHandler-members.html">List of all members</a>  </div>
 
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  <div class="headertitle">
 
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<div class="title">FidHandler Class Reference</div>  </div>
 
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</div><!--header-->
 
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<div class="contents">
 
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<p>Read-only fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> handler for XMass Analysis.  
 
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 <a href="classOpenMS_1_1Internal_1_1FidHandler.html#details">More...</a></p>
 
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<p><code>#include &lt;<a class="el" href="FidHandler_8h_source.html">OpenMS/FORMAT/HANDLERS/FidHandler.h</a>&gt;</code></p>
 
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<div class="dynheader">
 
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Inheritance diagram for FidHandler:</div>
 
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<div class="dyncontent">
 
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 <div class="center">
 
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  <img src="classOpenMS_1_1Internal_1_1FidHandler.png" usemap="#FidHandler_map" alt=""/>
 
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  <map id="FidHandler_map" name="FidHandler_map">
 
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</map>
 
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 </div></div>
 
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<table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
 
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Public Member Functions</h2></td></tr>
 
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<tr class="memitem:a054ccbde63d4b3149fd44400bdd837aa"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#a054ccbde63d4b3149fd44400bdd837aa">FidHandler</a> (const <a class="el" href="classOpenMS_1_1String.html">String</a> &amp;filename)</td></tr>
 
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<tr class="memdesc:a054ccbde63d4b3149fd44400bdd837aa"><td class="mdescLeft">&#160;</td><td class="mdescRight">Contructor with filename.  <a href="#a054ccbde63d4b3149fd44400bdd837aa">More...</a><br/></td></tr>
 
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<tr class="separator:a054ccbde63d4b3149fd44400bdd837aa"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a0906a17536d805a63e1a56cf45c04e4e"><td class="memItemLeft" align="right" valign="top">virtual&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#a0906a17536d805a63e1a56cf45c04e4e">~FidHandler</a> ()</td></tr>
 
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<tr class="memdesc:a0906a17536d805a63e1a56cf45c04e4e"><td class="mdescLeft">&#160;</td><td class="mdescRight">Destructor.  <a href="#a0906a17536d805a63e1a56cf45c04e4e">More...</a><br/></td></tr>
 
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<tr class="separator:a0906a17536d805a63e1a56cf45c04e4e"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:ac969b80b2c73a201d77b39da107e461b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#ac969b80b2c73a201d77b39da107e461b">getIndex</a> ()</td></tr>
 
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<tr class="memdesc:ac969b80b2c73a201d77b39da107e461b"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get index of current position (without position moving).  <a href="#ac969b80b2c73a201d77b39da107e461b">More...</a><br/></td></tr>
 
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<tr class="separator:ac969b80b2c73a201d77b39da107e461b"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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<tr class="memitem:a667c1efc1216fe89350491f7f1e5303c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#a667c1efc1216fe89350491f7f1e5303c">getIntensity</a> ()</td></tr>
 
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<tr class="memdesc:a667c1efc1216fe89350491f7f1e5303c"><td class="mdescLeft">&#160;</td><td class="mdescRight">Get intensity of current position and move to next position.  <a href="#a667c1efc1216fe89350491f7f1e5303c">More...</a><br/></td></tr>
 
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<tr class="separator:a667c1efc1216fe89350491f7f1e5303c"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
 
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Private Member Functions</h2></td></tr>
 
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<tr class="memitem:a5803e9aa15a7ed1ef338887c85c1e4f4"><td class="memItemLeft" align="right" valign="top">&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#a5803e9aa15a7ed1ef338887c85c1e4f4">FidHandler</a> ()</td></tr>
 
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<tr class="memdesc:a5803e9aa15a7ed1ef338887c85c1e4f4"><td class="mdescLeft">&#160;</td><td class="mdescRight">Private default constructor.  <a href="#a5803e9aa15a7ed1ef338887c85c1e4f4">More...</a><br/></td></tr>
 
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<tr class="separator:a5803e9aa15a7ed1ef338887c85c1e4f4"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table><table class="memberdecls">
 
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-attribs"></a>
 
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Private Attributes</h2></td></tr>
 
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<tr class="memitem:a8499544e603bf831c56d2c3414e456ae"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a>&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html#a8499544e603bf831c56d2c3414e456ae">index_</a></td></tr>
 
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<tr class="memdesc:a8499544e603bf831c56d2c3414e456ae"><td class="mdescLeft">&#160;</td><td class="mdescRight">Index of position.  <a href="#a8499544e603bf831c56d2c3414e456ae">More...</a><br/></td></tr>
 
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<tr class="separator:a8499544e603bf831c56d2c3414e456ae"><td class="memSeparator" colspan="2">&#160;</td></tr>
 
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</table>
 
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
 
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<div class="textblock"><p>Read-only fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> handler for XMass Analysis. </p>
 
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<p>fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> contains intensity array. Intensity for each point are coded in 4 bytes integer.</p>
 
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<dl class="section note"><dt>Note</dt><dd>Do not use this class directly. It is only needed for <a class="el" href="classOpenMS_1_1XMassFile.html" title="File adapter for &#39;XMass Analysis (fid)&#39; files. ">XMassFile</a>. </dd></dl>
 
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</div><h2 class="groupheader">Constructor &amp; Destructor Documentation</h2>
 
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<a class="anchor" id="a054ccbde63d4b3149fd44400bdd837aa"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html">FidHandler</a> </td>
 
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          <td>(</td>
 
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          <td class="paramtype">const <a class="el" href="classOpenMS_1_1String.html">String</a> &amp;&#160;</td>
 
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          <td class="paramname"><em>filename</em></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<p>Contructor with filename. </p>
 
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<p>Open fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a> as stream and initialize index.</p>
 
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<dl class="params"><dt>Parameters</dt><dd>
 
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  <table class="params">
 
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    <tr><td class="paramname">filename</td><td>to fid <a class="el" href="classOpenMS_1_1File.html" title="Basic file handling operations. ">File</a>. </td></tr>
 
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  </table>
 
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  </dd>
 
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</dl>
 
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</div>
 
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</div>
 
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<a class="anchor" id="a0906a17536d805a63e1a56cf45c04e4e"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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<table class="mlabels">
 
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  <tr>
 
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  <td class="mlabels-left">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname">virtual ~<a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html">FidHandler</a> </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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  </td>
 
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  <td class="mlabels-right">
 
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<span class="mlabels"><span class="mlabel">virtual</span></span>  </td>
 
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  </tr>
 
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</table>
 
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</div><div class="memdoc">
 
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<p>Destructor. </p>
 
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</div>
 
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</div>
 
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<a class="anchor" id="a5803e9aa15a7ed1ef338887c85c1e4f4"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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<table class="mlabels">
 
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  <tr>
 
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  <td class="mlabels-left">
 
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          <td class="memname"><a class="el" href="classOpenMS_1_1Internal_1_1FidHandler.html">FidHandler</a> </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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  </td>
 
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  <td class="mlabels-right">
 
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<span class="mlabels"><span class="mlabel">private</span></span>  </td>
 
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  </tr>
 
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</table>
 
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</div><div class="memdoc">
 
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<p>Private default constructor. </p>
 
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</div>
 
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</div>
 
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<h2 class="groupheader">Member Function Documentation</h2>
 
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<a class="anchor" id="ac969b80b2c73a201d77b39da107e461b"></a>
 
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        <tr>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getIndex </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<p>Get index of current position (without position moving). </p>
 
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</div>
 
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</div>
 
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<a class="anchor" id="a667c1efc1216fe89350491f7f1e5303c"></a>
 
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<div class="memitem">
 
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<div class="memproto">
 
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      <table class="memname">
 
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        <tr>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> getIntensity </td>
 
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          <td>(</td>
 
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          <td class="paramname"></td><td>)</td>
 
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          <td></td>
 
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        </tr>
 
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      </table>
 
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</div><div class="memdoc">
 
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<p>Get intensity of current position and move to next position. </p>
 
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</div>
 
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</div>
 
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<h2 class="groupheader">Member Data Documentation</h2>
 
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<a class="anchor" id="a8499544e603bf831c56d2c3414e456ae"></a>
 
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<div class="memitem">
 
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  <td class="mlabels-left">
 
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        <tr>
 
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          <td class="memname"><a class="el" href="group__Concept.html#gaf9ecec2d692138fab9167164a457cbd4">Size</a> index_</td>
 
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        </tr>
 
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      </table>
 
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  </td>
 
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  <td class="mlabels-right">
 
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<span class="mlabels"><span class="mlabel">private</span></span>  </td>
 
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  </tr>
 
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<p>Index of position. </p>
 
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
 
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:37 using doxygen 1.8.5</font></TD>
 
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