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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="namespaceOpenMS_1_1Math.html">Math</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a></li> </ul>
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<div class="title">ROCCurve Class Reference<div class="ingroups"><a class="el" href="group__Math.html">Math</a></div></div> </div>
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<p>ROCCurves show the tradeoff in sensitivity and specitivity for binary classifiers using different cutoff values.
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<a href="classOpenMS_1_1Math_1_1ROCCurve.html#details">More...</a></p>
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<p><code>#include <<a class="el" href="ROCCurve_8h_source.html">OpenMS/MATH/STATISTICS/ROCCurve.h</a>></code></p>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="nested-classes"></a>
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Classes</h2></td></tr>
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<tr class="memitem:"><td class="memItemLeft" align="right" valign="top">class  </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve_1_1simsortdec.html">simsortdec</a></td></tr>
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<tr class="memdesc:"><td class="mdescLeft"> </td><td class="mdescRight">predicate for sort() <a href="classOpenMS_1_1Math_1_1ROCCurve_1_1simsortdec.html#details">More...</a><br/></td></tr>
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr><td colspan="2"><div class="groupHeader"></div></td></tr>
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<tr class="memitem:a3331127a6b41a5d8d7410f44dbba0651"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a3331127a6b41a5d8d7410f44dbba0651">ROCCurve</a> ()</td></tr>
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<tr class="memdesc:a3331127a6b41a5d8d7410f44dbba0651"><td class="mdescLeft"> </td><td class="mdescRight">default constructor <a href="#a3331127a6b41a5d8d7410f44dbba0651">More...</a><br/></td></tr>
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<tr class="memitem:a96e89c09eec7ce22106fe04bce779fa7"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a96e89c09eec7ce22106fe04bce779fa7">~ROCCurve</a> ()</td></tr>
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<tr class="memdesc:a96e89c09eec7ce22106fe04bce779fa7"><td class="mdescLeft"> </td><td class="mdescRight">destructor <a href="#a96e89c09eec7ce22106fe04bce779fa7">More...</a><br/></td></tr>
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<tr class="memitem:a8113513e0e97550257516be8ed3c5008"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a8113513e0e97550257516be8ed3c5008">ROCCurve</a> (const <a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> &source)</td></tr>
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<tr class="memdesc:a8113513e0e97550257516be8ed3c5008"><td class="mdescLeft"> </td><td class="mdescRight">copy constructor <a href="#a8113513e0e97550257516be8ed3c5008">More...</a><br/></td></tr>
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<tr><td colspan="2"><div class="groupHeader"></div></td></tr>
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<tr class="memitem:a36fbc3a9cb63f3c38b5efafdd665089c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a36fbc3a9cb63f3c38b5efafdd665089c">operator=</a> (const <a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> &source)</td></tr>
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<tr class="memdesc:a36fbc3a9cb63f3c38b5efafdd665089c"><td class="mdescLeft"> </td><td class="mdescRight">assignment operator <a href="#a36fbc3a9cb63f3c38b5efafdd665089c">More...</a><br/></td></tr>
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<tr class="memitem:a1a221078417cf0b1da002a00ddd096e5"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a1a221078417cf0b1da002a00ddd096e5">insertPair</a> (<a class="el" href="classdouble.html">double</a> score, bool clas)</td></tr>
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<tr class="memdesc:a1a221078417cf0b1da002a00ddd096e5"><td class="mdescLeft"> </td><td class="mdescRight">insert score, type pair <a href="#a1a221078417cf0b1da002a00ddd096e5">More...</a><br/></td></tr>
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<tr class="memitem:a24d6d1f4ec19f75095aca7db96a318db"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a24d6d1f4ec19f75095aca7db96a318db">AUC</a> ()</td></tr>
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<tr class="memdesc:a24d6d1f4ec19f75095aca7db96a318db"><td class="mdescLeft"> </td><td class="mdescRight">returns Area Under Curve <a href="#a24d6d1f4ec19f75095aca7db96a318db">More...</a><br/></td></tr>
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<tr class="memitem:a3f34900da9e4891b51201eca98da356d"><td class="memItemLeft" align="right" valign="top">std::vector< std::pair< <a class="el" href="classdouble.html">double</a>, <br class="typebreak"/>
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<a class="el" href="classdouble.html">double</a> > > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a3f34900da9e4891b51201eca98da356d">curve</a> (<a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> resolution=10)</td></tr>
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<tr class="memdesc:a3f34900da9e4891b51201eca98da356d"><td class="mdescLeft"> </td><td class="mdescRight">some points in the ROC Curve <a href="#a3f34900da9e4891b51201eca98da356d">More...</a><br/></td></tr>
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<tr class="memitem:a9f2634099fda0b4e2dd74add7d35d417"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a9f2634099fda0b4e2dd74add7d35d417">cutoffPos</a> (<a class="el" href="classdouble.html">double</a> fraction=0.95)</td></tr>
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<tr class="memitem:adfc68429e56bd216d87ea760d3510a2c"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#adfc68429e56bd216d87ea760d3510a2c">cutoffNeg</a> (<a class="el" href="classdouble.html">double</a> fraction=0.95)</td></tr>
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Private Attributes</h2></td></tr>
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<tr class="memitem:a78997ff796f7446a0dc50f01d0b44b05"><td class="memItemLeft" align="right" valign="top">std::list< std::pair< <a class="el" href="classdouble.html">double</a>, <br class="typebreak"/>
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bool > > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#a78997ff796f7446a0dc50f01d0b44b05">score_clas_pairs_</a></td></tr>
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<tr class="memitem:af115785cb1865606754eb19bca67ed76"><td class="memItemLeft" align="right" valign="top"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html#af115785cb1865606754eb19bca67ed76">pos_</a></td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
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<div class="textblock"><p>ROCCurves show the tradeoff in sensitivity and specitivity for binary classifiers using different cutoff values. </p>
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<p>[This class is buggy and usage is discouraged!] </p>
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</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<td class="memname"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> </td>
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<td class="paramname"></td><td>)</td>
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<p>default constructor </p>
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<td class="memname">virtual ~<a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> </td>
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<td class="paramname"></td><td>)</td>
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<span class="mlabels"><span class="mlabel">virtual</span></span> </td>
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<td class="memname"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> & </td>
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<td class="paramname"><em>source</em></td><td>)</td>
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<p>copy constructor </p>
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<h2 class="groupheader">Member Function Documentation</h2>
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<td class="memname"><a class="el" href="classdouble.html">double</a> AUC </td>
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<p>returns Area Under Curve </p>
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<td class="memname">std::vector<std::pair<<a class="el" href="classdouble.html">double</a>, <a class="el" href="classdouble.html">double</a>> > curve </td>
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<td class="paramtype"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> </td>
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<td class="paramname"><em>resolution</em> = <code>10</code></td><td>)</td>
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<p>some points in the ROC Curve </p>
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<td class="memname"><a class="el" href="classdouble.html">double</a> cutoffNeg </td>
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<td class="paramtype"><a class="el" href="classdouble.html">double</a> </td>
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<td class="paramname"><em>fraction</em> = <code>0.95</code></td><td>)</td>
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<td class="memname"><a class="el" href="classdouble.html">double</a> cutoffPos </td>
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<td class="paramname"><em>fraction</em> = <code>0.95</code></td><td>)</td>
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<td class="memname">void insertPair </td>
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<td class="paramtype"><a class="el" href="classdouble.html">double</a> </td>
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<td class="paramname"><em>score</em>, </td>
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<td class="paramtype">bool </td>
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<td class="paramname"><em>clas</em> </td>
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<p>insert score, type pair </p>
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<td class="memname"><a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a>& operator= </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1Math_1_1ROCCurve.html">ROCCurve</a> & </td>
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<td class="paramname"><em>source</em></td><td>)</td>
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<p>assignment operator </p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<td class="memname"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> neg_</td>
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<td class="memname"><a class="el" href="group__Concept.html#gaba0996d26f7be2572973245b51852757">UInt</a> pos_</td>
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<td class="memname">std::list<std::pair<<a class="el" href="classdouble.html">double</a>, bool> > score_clas_pairs_</td>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:38 using doxygen 1.8.5</font></TD>
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