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<li class="navelem"><a class="el" href="dir_e770f0cf77e550adde3f44739ef529fe.html">include</a></li><li class="navelem"><a class="el" href="dir_6a63c4937d4da007e55fff5dcf71e0f8.html">OpenMS</a></li><li class="navelem"><a class="el" href="dir_330fe73d44ce641f33dd6036f80161a5.html">ANALYSIS</a></li><li class="navelem"><a class="el" href="dir_8b5fa5a938a8162745e4cf0197528bc9.html">MAPMATCHING</a></li> </ul>
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<div class="title">ConsensusMapNormalizerAlgorithmMedian.h</div> </div>
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<a href="ConsensusMapNormalizerAlgorithmMedian_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
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<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="comment">// OpenMS -- Open-Source Mass Spectrometry</span></div>
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<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
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<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="comment">// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,</span></div>
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<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="comment">// ETH Zurich, and Freie Universitaet Berlin 2002-2013.</span></div>
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<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="comment">//</span></div>
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<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="comment">// This software is released under a three-clause BSD license:</span></div>
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<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="comment">// * Redistributions of source code must retain the above copyright</span></div>
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<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">// notice, this list of conditions and the following disclaimer.</span></div>
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<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">// * Redistributions in binary form must reproduce the above copyright</span></div>
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<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// notice, this list of conditions and the following disclaimer in the</span></div>
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<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// documentation and/or other materials provided with the distribution.</span></div>
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<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// * Neither the name of any author or any participating institution</span></div>
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<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">// may be used to endorse or promote products derived from this software</span></div>
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<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <span class="comment">// without specific prior written permission.</span></div>
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<div class="line"><a name="l00031"></a><span class="lineno"> 31</span> <span class="comment">// $Maintainer: Johannes Junker $</span></div>
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<div class="line"><a name="l00032"></a><span class="lineno"> 32</span> <span class="comment">// $Authors: Johannes Junker $</span></div>
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<div class="line"><a name="l00033"></a><span class="lineno"> 33</span> <span class="comment">// --------------------------------------------------------------------------</span></div>
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<div class="line"><a name="l00034"></a><span class="lineno"> 34</span> </div>
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<div class="line"><a name="l00035"></a><span class="lineno"> 35</span> <span class="preprocessor">#ifndef OPENMS_ANALYSIS_MAPMATCHING_CONSENSUSMAPNORMALIZERALGORITHMMEDIAN_H</span></div>
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<div class="line"><a name="l00036"></a><span class="lineno"> 36</span> <span class="preprocessor"></span><span class="preprocessor">#define OPENMS_ANALYSIS_MAPMATCHING_CONSENSUSMAPNORMALIZERALGORITHMMEDIAN_H</span></div>
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<div class="line"><a name="l00037"></a><span class="lineno"> 37</span> <span class="preprocessor"></span></div>
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<div class="line"><a name="l00038"></a><span class="lineno"> 38</span> <span class="preprocessor">#include <<a class="code" href="ConsensusMap_8h.html">OpenMS/KERNEL/ConsensusMap.h</a>></span></div>
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<div class="line"><a name="l00039"></a><span class="lineno"> 39</span> </div>
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<div class="line"><a name="l00040"></a><span class="lineno"> 40</span> <span class="keyword">namespace </span>OpenMS</div>
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<div class="line"><a name="l00041"></a><span class="lineno"> 41</span> {</div>
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<div class="line"><a name="l00042"></a><span class="lineno"> 42</span> </div>
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<div class="line"><a name="l00047"></a><span class="lineno"><a class="line" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html"> 47</a></span>  <span class="keyword">class </span>OPENMS_DLLAPI <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a></div>
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<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>  {</div>
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<div class="line"><a name="l00049"></a><span class="lineno"> 49</span> <span class="keyword">private</span>:</div>
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<div class="line"><a name="l00051"></a><span class="lineno"> 51</span>  <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a>(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a> & copyin);</div>
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<div class="line"><a name="l00052"></a><span class="lineno"> 52</span> </div>
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<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>  <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a> & operator=(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a> & rhs);</div>
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<div class="line"><a name="l00055"></a><span class="lineno"> 55</span> </div>
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<div class="line"><a name="l00056"></a><span class="lineno"> 56</span> <span class="keyword">public</span>:</div>
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<div class="line"><a name="l00058"></a><span class="lineno"> 58</span>  <a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a>();</div>
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<div class="line"><a name="l00059"></a><span class="lineno"> 59</span> </div>
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<div class="line"><a name="l00061"></a><span class="lineno"> 61</span>  <span class="keyword">virtual</span> ~<a class="code" href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">ConsensusMapNormalizerAlgorithmMedian</a>();</div>
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<div class="line"><a name="l00062"></a><span class="lineno"> 62</span> </div>
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<div class="line"><a name="l00067"></a><span class="lineno"> 67</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> normalizeMaps(<a class="code" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> & map);</div>
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<div class="line"><a name="l00068"></a><span class="lineno"> 68</span> </div>
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<div class="line"><a name="l00073"></a><span class="lineno"> 73</span>  <span class="keyword">static</span> std::vector<double> computeNormalizationFactors(<span class="keyword">const</span> <a class="code" href="classOpenMS_1_1ConsensusMap.html">ConsensusMap</a> & map);</div>
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<div class="line"><a name="l00074"></a><span class="lineno"> 74</span>  };</div>
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<div class="line"><a name="l00075"></a><span class="lineno"> 75</span> </div>
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<div class="line"><a name="l00076"></a><span class="lineno"> 76</span> } <span class="comment">// namespace OpenMS</span></div>
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<div class="line"><a name="l00077"></a><span class="lineno"> 77</span> </div>
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<div class="line"><a name="l00078"></a><span class="lineno"> 78</span> <span class="preprocessor">#endif // OPENMS_ANALYSIS_MAPMATCHING_CONSENSUSMAPNORMALIZERALGORITHMMEDIAN_H</span></div>
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<div class="ttc" id="ConsensusMap_8h_html"><div class="ttname"><a href="ConsensusMap_8h.html">ConsensusMap.h</a></div></div>
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<div class="ttc" id="classOpenMS_1_1ConsensusMap_html"><div class="ttname"><a href="classOpenMS_1_1ConsensusMap.html">OpenMS::ConsensusMap</a></div><div class="ttdoc">A container for consensus elements. </div><div class="ttdef"><b>Definition:</b> ConsensusMap.h:60</div></div>
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<div class="ttc" id="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian_html"><div class="ttname"><a href="classOpenMS_1_1ConsensusMapNormalizerAlgorithmMedian.html">OpenMS::ConsensusMapNormalizerAlgorithmMedian</a></div><div class="ttdoc">Algorithms of ConsensusMapNormalizer. </div><div class="ttdef"><b>Definition:</b> ConsensusMapNormalizerAlgorithmMedian.h:47</div></div>
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:12 using doxygen 1.8.5</font></TD>