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<li class="navelem"><a class="el" href="namespaceOpenMS.html">OpenMS</a></li><li class="navelem"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a></li> </ul>
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<a href="#pub-methods">Public Member Functions</a> |
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<div class="title">LCElutionPeak Class Reference</div> </div>
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<p><code>#include <<a class="el" href="LCElutionPeak_8h_source.html">OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.h</a>></code></p>
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<table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
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Public Member Functions</h2></td></tr>
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<tr class="memitem:ad2e615895cfb435b7cf673fcc90dfade"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ad2e615895cfb435b7cf673fcc90dfade">~LCElutionPeak</a> ()</td></tr>
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<tr class="separator:ad2e615895cfb435b7cf673fcc90dfade"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a573e8e2b4501924584df77962527c737"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a573e8e2b4501924584df77962527c737">LCElutionPeak</a> ()</td></tr>
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<tr class="separator:a573e8e2b4501924584df77962527c737"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:af1582b485ed4ac9e9f2101fd79c3c90f"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#af1582b485ed4ac9e9f2101fd79c3c90f">LCElutionPeak</a> (<a class="el" href="namespaceOpenMS.html#a79e6b2973636a97ad0228a737ddcbed6">MZ_series_ITERATOR</a>, <a class="el" href="classdouble.html">double</a>)</td></tr>
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<tr class="memitem:a208724eacc34907d7cf64dcd2a3572c9"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a208724eacc34907d7cf64dcd2a3572c9">LCElutionPeak</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:a71205231a3906db471358e9a61a814b2"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a71205231a3906db471358e9a61a814b2">LCElutionPeak</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> *)</td></tr>
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<tr class="memitem:a6fec4c9e10aa7806d2e811e5f59f2219"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a6fec4c9e10aa7806d2e811e5f59f2219">analyzeLCElutionPeak</a> ()</td></tr>
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<tr class="memitem:a53e3e55b0153576c1840554866cfc4aa"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a53e3e55b0153576c1840554866cfc4aa">setSNIntensityThreshold</a> ()</td></tr>
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<tr class="memitem:a63aa08cf1850f1e19e1541344dbebff6"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a63aa08cf1850f1e19e1541344dbebff6">computeLCElutionPeakParameters</a> ()</td></tr>
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<tr class="memitem:a87ba885774fef1b82071649472e28551"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a87ba885774fef1b82071649472e28551">compute_delta_area</a> (<a class="el" href="classdouble.html">double</a>, <a class="el" href="classdouble.html">double</a>, <a class="el" href="classdouble.html">double</a>, <a class="el" href="classdouble.html">double</a>)</td></tr>
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<tr class="memitem:a8c04f05c710a3375baa8c6c40f5ceef3"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a8c04f05c710a3375baa8c6c40f5ceef3">remove_background_peak</a> ()</td></tr>
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<tr class="memitem:a59eff6de209cb0d718389bc53cd9f788"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a59eff6de209cb0d718389bc53cd9f788">compute_CHRG</a> ()</td></tr>
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<tr class="memitem:a899d807269b0d040e2f8a6b67fa86f90"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a899d807269b0d040e2f8a6b67fa86f90">defineLCElutionPeakParametersFromMSPeak</a> ()</td></tr>
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<tr class="memitem:a43982f54908ff5acb4b9372fead9a136"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a43982f54908ff5acb4b9372fead9a136">createConsensIsotopPattern</a> ()</td></tr>
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<tr class="memitem:a7c3497bc7ff500849613d5fb30de1274"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a7c3497bc7ff500849613d5fb30de1274">print_profile</a> (std::ofstream *)</td></tr>
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<tr class="memitem:a00b59d12a45716ef2c60c6d15daf1cbe"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a00b59d12a45716ef2c60c6d15daf1cbe">find_true_peak</a> (float)</td></tr>
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<tr class="memitem:a2e9d48057a35df4e7a2b7403186000b6"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a2e9d48057a35df4e7a2b7403186000b6">show_info</a> ()</td></tr>
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<tr class="memitem:af249efb69e068e070ca66dbafe856940"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#af249efb69e068e070ca66dbafe856940">operator=</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:ab53b5ce6967ddde72e5fb29cd81804df"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ab53b5ce6967ddde72e5fb29cd81804df">operator<=</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:a3008034297c54743144ee30556feb785"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a3008034297c54743144ee30556feb785">operator>=</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:a7e3a42bd4fe66d2f2a2b37864c00fc2b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a7e3a42bd4fe66d2f2a2b37864c00fc2b">operator<</a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:abc7d534f37398770a6564d52b1b0bb0b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#abc7d534f37398770a6564d52b1b0bb0b">operator></a> (const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> &)</td></tr>
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<tr class="memitem:ac81d671afeef6f8fb49a01556d7ca47c"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ac81d671afeef6f8fb49a01556d7ca47c">setElutionPeakExtraInfo</a> (std::string in)</td></tr>
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<tr class="memitem:a364c5a3b05ab685c42af06bc462b3344"><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a364c5a3b05ab685c42af06bc462b3344">getElutionPeakExtraInfo</a> ()</td></tr>
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<tr class="memitem:aaab6cb4b26d8f84a94eee092b755c66b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespaceOpenMS.html#a86f33425d6d3c820cf964cacc9a3fd34">SIGNAL_iterator</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aaab6cb4b26d8f84a94eee092b755c66b">get_signal_list_start</a> ()</td></tr>
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<tr class="memitem:a47e3af93b063da2448711d8a8f250a1a"><td class="memItemLeft" align="right" valign="top"><a class="el" href="namespaceOpenMS.html#a86f33425d6d3c820cf964cacc9a3fd34">SIGNAL_iterator</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a47e3af93b063da2448711d8a8f250a1a">get_signal_list_end</a> ()</td></tr>
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<tr class="memitem:a49294cdec251db872fb2b9355a697057"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a49294cdec251db872fb2b9355a697057">set_apex_retention_time</a> (<a class="el" href="classdouble.html">double</a> IN)</td></tr>
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<tr class="memitem:a7c2cde6b2669674ee10ac27ed0b38f03"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a7c2cde6b2669674ee10ac27ed0b38f03">update_CHRGMAP</a> (<a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a> *IN)</td></tr>
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<tr class="memitem:a1a0d8a914f8b9c1189829edcb142a93d"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a1a0d8a914f8b9c1189829edcb142a93d">get_scan_apex</a> ()</td></tr>
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<tr class="memitem:ab812559cf209574e7cdc97e740d8600e"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ab812559cf209574e7cdc97e740d8600e">get_apex_intensity</a> ()</td></tr>
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<tr class="memitem:a71bd48a0a57a43a9d57adb02cf478e47"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a71bd48a0a57a43a9d57adb02cf478e47">get_apex_retention_time</a> ()</td></tr>
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<tr class="memitem:ab3d9ebea3826de1e67b776e6579f9af1"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ab3d9ebea3826de1e67b776e6579f9af1">get_apex_MZ</a> ()</td></tr>
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<tr class="memitem:aedffea12c90a091f3642027871dcce00"><td class="memItemLeft" align="right" valign="top">float </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aedffea12c90a091f3642027871dcce00">get_intensity</a> (int IN)</td></tr>
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<tr class="memitem:a8a3c711c282a880a001bbb01691eae99"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a8a3c711c282a880a001bbb01691eae99">get_MZ</a> (int)</td></tr>
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<tr class="memitem:a0f4a36df4dbdfd4a99366bcd24ae344f"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a0f4a36df4dbdfd4a99366bcd24ae344f">get_total_peak_area</a> ()</td></tr>
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<tr class="memitem:a5bdcacef9b788e18c0dd8c323186c390"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a5bdcacef9b788e18c0dd8c323186c390">get_start_scan</a> ()</td></tr>
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<tr class="memitem:aa5d97ba2d1f5db95c28860a4a2c5ce36"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aa5d97ba2d1f5db95c28860a4a2c5ce36">get_end_scan</a> ()</td></tr>
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<tr class="memitem:a00e30b5e53b81e2957fb095937eab517"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a00e30b5e53b81e2957fb095937eab517">set_start_retention_time</a> (<a class="el" href="classdouble.html">double</a> IN)</td></tr>
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<tr class="memitem:a1e5411880247f3ff9aed8ed75b23b7e4"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a1e5411880247f3ff9aed8ed75b23b7e4">get_start_retention_time</a> ()</td></tr>
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<tr class="memitem:aa2f8a9c427c40f47910cdbfa03915cd8"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aa2f8a9c427c40f47910cdbfa03915cd8">set_end_retention_time</a> (<a class="el" href="classdouble.html">double</a> IN)</td></tr>
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<tr class="memitem:a068dc107c061c02358e286404d49258a"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a068dc107c061c02358e286404d49258a">get_end_retention_time</a> ()</td></tr>
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<tr class="memitem:a53ac877069cd954216c872fa56d301db"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a53ac877069cd954216c872fa56d301db">get_nb_ms_peaks</a> ()</td></tr>
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<tr class="memitem:a7cc0ff90acee6ff6f42056737fb78a22"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a7cc0ff90acee6ff6f42056737fb78a22">get_charge_state</a> ()</td></tr>
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<tr class="memitem:a4bb41c31d39852daaa13eb35f5f04b23"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a4bb41c31d39852daaa13eb35f5f04b23">getSignalToNoise</a> ()</td></tr>
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<tr class="memitem:a9161872721a7fda574c3e2133d69a9a9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a9161872721a7fda574c3e2133d69a9a9">getSignalToNoiseBackground</a> ()</td></tr>
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</table><table class="memberdecls">
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<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-static-attribs"></a>
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Static Public Attributes</h2></td></tr>
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<tr class="memitem:aeacd03494bac7bbad33feadfb81e613a"><td class="memItemLeft" align="right" valign="top">static <a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aeacd03494bac7bbad33feadfb81e613a">DEBUG_MASS_START</a></td></tr>
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<tr class="memitem:acb7760252e63bf27414aeb15575b3b68"><td class="memItemLeft" align="right" valign="top">static <a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#acb7760252e63bf27414aeb15575b3b68">DEBUG_MASS_END</a></td></tr>
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Protected Attributes</h2></td></tr>
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<tr class="memitem:ac51a16752e2e401cad22b5f6c2665924"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ac51a16752e2e401cad22b5f6c2665924">fMonoMass</a></td></tr>
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<tr class="memitem:a7a3ac2f5ce9bd348d2fde4597d7c8bed"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a7a3ac2f5ce9bd348d2fde4597d7c8bed">fVolume</a></td></tr>
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<tr class="memitem:a2e1ce7191795f93224d0c7c556dc54fa"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a2e1ce7191795f93224d0c7c556dc54fa">fCharge</a></td></tr>
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<tr class="memitem:a6cf5b2361685fd6e7fde43a96498ce9e"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a6cf5b2361685fd6e7fde43a96498ce9e">fScanNumberStart</a></td></tr>
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<tr class="memitem:aa35ecbe8a1c84b062addb6b6255b2fb2"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aa35ecbe8a1c84b062addb6b6255b2fb2">fScanNumberApex</a></td></tr>
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<tr class="memitem:af77af24ac504f5f44a91f1ca24f34864"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#af77af24ac504f5f44a91f1ca24f34864">fScanNumberEnd</a></td></tr>
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<tr class="memitem:a99157c03ee77754d15cb31611586265d"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a99157c03ee77754d15cb31611586265d">fapex_intensity</a></td></tr>
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<tr class="memitem:a44cd080df0f59602c14eb29fb6128cc5"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a44cd080df0f59602c14eb29fb6128cc5">fRT</a></td></tr>
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<tr class="memitem:a312f7c201776e27ecd97e85a0e7f5024"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a312f7c201776e27ecd97e85a0e7f5024">fStartTR</a></td></tr>
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<tr class="memitem:a204b174e9a86216f70de4eb0aa71fda6"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a204b174e9a86216f70de4eb0aa71fda6">fEndTR</a></td></tr>
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<tr class="separator:a204b174e9a86216f70de4eb0aa71fda6"><td class="memSeparator" colspan="2"> </td></tr>
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<tr class="memitem:a02910972b1977ebde5a95e3b86d7722b"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a02910972b1977ebde5a95e3b86d7722b">fpeak_area</a></td></tr>
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<tr class="memitem:a64013730f99f52c28ff480e63b75ea78"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a64013730f99f52c28ff480e63b75ea78">fSignalToNoise</a></td></tr>
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<tr class="memitem:addc9ab666f80e876c8571db7f3a8e069"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#addc9ab666f80e876c8571db7f3a8e069">fSNIntensityThreshold</a></td></tr>
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<tr class="memitem:a721772ba0ec677852bf5c94ae467c195"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a721772ba0ec677852bf5c94ae467c195">APEX</a></td></tr>
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<tr class="memitem:aae48edd486239c935bb45c15712fa9e5"><td class="memItemLeft" align="right" valign="top">std::string </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aae48edd486239c935bb45c15712fa9e5">elutionPeakExtraInfo</a></td></tr>
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<tr class="memitem:abdecd7687dcc666c696fca36cb7ee768"><td class="memItemLeft" align="right" valign="top">std::multimap< int, <a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a> > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#abdecd7687dcc666c696fca36cb7ee768">intens_signals</a></td></tr>
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<tr class="memitem:aa34a1124f2a9332ea102d2cab19580c2"><td class="memItemLeft" align="right" valign="top">std::multimap< int, int > </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aa34a1124f2a9332ea102d2cab19580c2">CHRG_MAP</a></td></tr>
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</table><table class="memberdecls">
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Private Attributes</h2></td></tr>
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<tr class="memitem:aa624be0a99fd8e5e73fc019d3f5790e1"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classOpenMS_1_1ConsensusIsotopePattern.html">ConsensusIsotopePattern</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#aa624be0a99fd8e5e73fc019d3f5790e1">isotopePattern</a></td></tr>
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<tr class="memitem:ae08b9afa83396a99cf29848c902b1b5f"><td class="memItemLeft" align="right" valign="top">int </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#ae08b9afa83396a99cf29848c902b1b5f">fNrIsotopes</a></td></tr>
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<tr class="memitem:a3e554fdf19c9a25b10ec1264bf68bec8"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a3e554fdf19c9a25b10ec1264bf68bec8">f_observed_Mass</a></td></tr>
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<tr class="memitem:a508b1c44a0cfd87efba4d6a2febb4231"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classdouble.html">double</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classOpenMS_1_1LCElutionPeak.html#a508b1c44a0cfd87efba4d6a2febb4231">fIsotopMass</a></td></tr>
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<h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<td class="memname">~<a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> </td>
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<td class="paramname"></td><td>)</td>
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> </td>
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<td class="paramname"></td><td>)</td>
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> </td>
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<td class="paramname">, </td>
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> * </td>
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<h2 class="groupheader">Member Function Documentation</h2>
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<td class="memname">void compute_CHRG </td>
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<td class="memname"><a class="el" href="classdouble.html">double</a> compute_delta_area </td>
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<td class="memname">void computeLCElutionPeakParameters </td>
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<td class="memname"><a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a>* find_true_peak </td>
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> get_apex_retention_time </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a7cc0ff90acee6ff6f42056737fb78a22"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int get_charge_state </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a068dc107c061c02358e286404d49258a"></a>
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<div class="memitem">
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<div class="memproto">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> get_end_retention_time </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aa5d97ba2d1f5db95c28860a4a2c5ce36"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int get_end_scan </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aedffea12c90a091f3642027871dcce00"></a>
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<div class="memproto">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">float get_intensity </td>
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<td class="paramtype">int </td>
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<td class="paramname"><em>IN</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a8a3c711c282a880a001bbb01691eae99"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> get_MZ </td>
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<td class="paramtype">int </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a53ac877069cd954216c872fa56d301db"></a>
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int get_nb_ms_peaks </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a1a0d8a914f8b9c1189829edcb142a93d"></a>
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int get_scan_apex </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a47e3af93b063da2448711d8a8f250a1a"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="namespaceOpenMS.html#a86f33425d6d3c820cf964cacc9a3fd34">SIGNAL_iterator</a> get_signal_list_end </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aaab6cb4b26d8f84a94eee092b755c66b"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="namespaceOpenMS.html#a86f33425d6d3c820cf964cacc9a3fd34">SIGNAL_iterator</a> get_signal_list_start </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a1e5411880247f3ff9aed8ed75b23b7e4"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> get_start_retention_time </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a5bdcacef9b788e18c0dd8c323186c390"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int get_start_scan </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a0f4a36df4dbdfd4a99366bcd24ae344f"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> get_total_peak_area </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a364c5a3b05ab685c42af06bc462b3344"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">std::string getElutionPeakExtraInfo </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a4bb41c31d39852daaa13eb35f5f04b23"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> getSignalToNoise </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a9161872721a7fda574c3e2133d69a9a9"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> getSignalToNoiseBackground </td>
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<td class="paramname"></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a7e3a42bd4fe66d2f2a2b37864c00fc2b"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a>& operator< </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="ab53b5ce6967ddde72e5fb29cd81804df"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a>& operator<= </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="af249efb69e068e070ca66dbafe856940"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a>& operator= </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="abc7d534f37398770a6564d52b1b0bb0b"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a>& operator> </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a3008034297c54743144ee30556feb785"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a>& operator>= </td>
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<td class="paramtype">const <a class="el" href="classOpenMS_1_1LCElutionPeak.html">LCElutionPeak</a> & </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a7c3497bc7ff500849613d5fb30de1274"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">void print_profile </td>
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<td class="paramtype">std::ofstream * </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a8c04f05c710a3375baa8c6c40f5ceef3"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">void remove_background_peak </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a49294cdec251db872fb2b9355a697057"></a>
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void set_apex_retention_time </td>
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<td class="paramtype"><a class="el" href="classdouble.html">double</a> </td>
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<td class="paramname"><em>IN</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aa2f8a9c427c40f47910cdbfa03915cd8"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void set_end_retention_time </td>
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<td class="paramtype"><a class="el" href="classdouble.html">double</a> </td>
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<td class="paramname"><em>IN</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a00e30b5e53b81e2957fb095937eab517"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void set_start_retention_time </td>
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<td class="paramtype"><a class="el" href="classdouble.html">double</a> </td>
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<td class="paramname"><em>IN</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="ac81d671afeef6f8fb49a01556d7ca47c"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void setElutionPeakExtraInfo </td>
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<td class="paramtype">std::string </td>
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<td class="paramname"><em>in</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a53e3e55b0153576c1840554866cfc4aa"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">void setSNIntensityThreshold </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a2e9d48057a35df4e7a2b7403186000b6"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="memname">
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<td class="memname">void show_info </td>
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<td class="paramname"></td><td>)</td>
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</div><div class="memdoc">
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<a class="anchor" id="a7c2cde6b2669674ee10ac27ed0b38f03"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">void update_CHRGMAP </td>
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<td class="paramtype"><a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a> * </td>
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<td class="paramname"><em>IN</em></td><td>)</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">inline</span></span> </td>
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</div><div class="memdoc">
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<p>References <a class="el" href="classOpenMS_1_1MSPeak.html#a56d6a680a88ac07ad6e23417cfbebb6f">MSPeak::get_charge_state()</a>.</p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<a class="anchor" id="a721772ba0ec677852bf5c94ae467c195"></a>
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a>* APEX</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aa34a1124f2a9332ea102d2cab19580c2"></a>
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<div class="memitem">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">std::multimap<int, int> CHRG_MAP</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="acb7760252e63bf27414aeb15575b3b68"></a>
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<div class="memitem">
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<div class="memproto">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> DEBUG_MASS_END</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aeacd03494bac7bbad33feadfb81e613a"></a>
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<div class="memitem">
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<td class="mlabels-left">
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<td class="memname"><a class="el" href="classdouble.html">double</a> DEBUG_MASS_START</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="aae48edd486239c935bb45c15712fa9e5"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">std::string elutionPeakExtraInfo</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a3e554fdf19c9a25b10ec1264bf68bec8"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> f_observed_Mass</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a99157c03ee77754d15cb31611586265d"></a>
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<div class="memitem">
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<div class="memproto">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> fapex_intensity</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a2e1ce7191795f93224d0c7c556dc54fa"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname">int fCharge</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a204b174e9a86216f70de4eb0aa71fda6"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> fEndTR</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">protected</span></span> </td>
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</div><div class="memdoc">
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<a class="anchor" id="a508b1c44a0cfd87efba4d6a2febb4231"></a>
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<div class="memitem">
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<div class="memproto">
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<table class="mlabels">
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<td class="mlabels-left">
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<table class="memname">
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<td class="memname"><a class="el" href="classdouble.html">double</a> fIsotopMass</td>
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<td class="mlabels-right">
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<span class="mlabels"><span class="mlabel">private</span></span> </td>
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<td class="memname"><a class="el" href="classdouble.html">double</a> fMonoMass</td>
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<td class="memname"><a class="el" href="classdouble.html">double</a> fStartTR</td>
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<td class="memname">std::multimap<int, <a class="el" href="classOpenMS_1_1MSPeak.html">MSPeak</a>> intens_signals</td>
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<td class="memname"><a class="el" href="classOpenMS_1_1ConsensusIsotopePattern.html">ConsensusIsotopePattern</a>* isotopePattern</td>
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</div><!-- contents -->
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<HR style="height:1px; border:none; border-top:1px solid #c0c0c0;">
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<TD><font color="#c0c0c0">OpenMS / TOPP release 1.11.1</font></TD>
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<TD align="right"><font color="#c0c0c0">Documentation generated on Thu Nov 14 2013 11:19:35 using doxygen 1.8.5</font></TD>
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