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Viewing changes to pyOpenMS/pxds/SignalToNoiseEstimatorMedian.pxd

  • Committer: Package Import Robot
  • Author(s): Filippo Rusconi
  • Date: 2013-12-20 11:30:16 UTC
  • mfrom: (5.1.2 sid)
  • Revision ID: package-import@ubuntu.com-20131220113016-wre5g9bteeheq6he
Tags: 1.11.1-3
* remove version number from libbost development package names;
* ensure that AUTHORS is correctly shipped in all packages.

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pyOpenMS/pxds/SignalToNoiseEstimatorMedian.pxd
 
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from ProgressLogger cimport *
 
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from DefaultParamHandler cimport *
 
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from MSExperiment cimport *
 
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from MSSpectrum cimport *
 
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from Peak1D cimport *
 
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from ChromatogramPeak cimport *
 
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from MSChromatogram cimport *
 
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cdef extern from "<OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h>" namespace "OpenMS":
 
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    cdef cppclass SignalToNoiseEstimatorMedian[SpectrumT]:
 
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        # wrap-instances:
 
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        #   SignalToNoiseEstimatorMedian := SignalToNoiseEstimatorMedian[MSSpectrum[Peak1D]]
 
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        SignalToNoiseEstimatorMedian() nogil except +
 
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        SignalToNoiseEstimatorMedian(SignalToNoiseEstimatorMedian) nogil except +
 
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        void init(MSSpectrum[Peak1D] & spectrum) nogil except +
 
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        void getSignalToNoise(Peak1D & data_point) nogil except +
 
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        # Functions for SignalToNoiseEstimatorMedianChrom[MSChromatogram[ChromatogramPeak]]
 
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        # use wrap-ignore because autowrap cannot handle them at the moment
 
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        # see addons/SignalToNoiseEstimatorMedianChrom.pyx for the implementation
 
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        void init(MSChromatogram[ChromatogramPeak] & spectrum) nogil except + #wrap-ignore
 
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        void getSignalToNoise(ChromatogramPeak & data_point) nogil except + #wrap-ignore
 
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cdef extern from "<OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h>" namespace "OpenMS::SignalToNoiseEstimatorMedian":
 
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    cdef enum IntensityThresholdCalculation "OpenMS::SignalToNoiseEstimatorMedianChrom::IntensityThresholdCalculation":
 
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        MANUAL
 
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        AUTOMAXBYSTDEV
 
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        AUTOMAXBYPERCENT