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Viewing changes to Bio/Cluster/ClusterFactory.pm

  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2009-03-10 07:19:11 UTC
  • mfrom: (1.2.3 upstream)
  • Revision ID: james.westby@ubuntu.com-20090310071911-fukqzw54pyb1f0bd
Tags: 1.6.0-2
https://launchpad.net/bugs/324001
* Removed patch system (not used):
  - removed instuctions in debian/rules;
  - removed quilt from Build-Depends in debian/control.
* Re-enabled tests:
  - uncommented test command in debian/rules;
  - uncommented previously missing build-dependencies in debian/control.
  - Re-enabled tests and uncommented build-dependencies accordingly.
* Removed libmodule-build-perl and libtest-harness-perl from
  Build-Depends-Indep (provided by perl-modules).
* Better cleaning of empty directories using find -type d -empty -delete
  instead of rmdir in debian/rules (LP: #324001).

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Lines of Context:
Bio/Cluster/ClusterFactory.pm
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# $Id: ClusterFactory.pm,v 1.6.4.1 2006/10/02 23:10:13 sendu Exp $
 
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# $Id: ClusterFactory.pm 11480 2007-06-14 14:16:21Z sendu $
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#
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# BioPerl module for Bio::Cluster::ClusterFactory
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#
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    use Bio::Cluster::ClusterFactory;
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    # if you don't provide a default type, the factory will try
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    # some guesswork based on display_id and namespace
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    my $factory = new Bio::Cluster::ClusterFactory(-type => 'Bio::Cluster::UniGene');
 
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    my $factory = Bio::Cluster::ClusterFactory->new(-type => 'Bio::Cluster::UniGene');
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    my $clu = $factory->create_object(-description => 'NAT',
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                                      -display_id  => 'Hs.2');
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=head2 new
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 Title   : new
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 Usage   : my $obj = new Bio::Cluster::ClusterFactory();
 
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 Usage   : my $obj = Bio::Cluster::ClusterFactory->new();
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 Function: Builds a new Bio::Cluster::ClusterFactory object 
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 Returns : Bio::Cluster::ClusterFactory
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 Args    : -type => string, name of a ClusterI derived class.