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Viewing changes to t/data/transfac_pro/fragment.dat

  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2009-03-10 07:19:11 UTC
  • mfrom: (1.2.3 upstream)
  • Revision ID: james.westby@ubuntu.com-20090310071911-fukqzw54pyb1f0bd
Tags: 1.6.0-2
https://launchpad.net/bugs/324001
* Removed patch system (not used):
  - removed instuctions in debian/rules;
  - removed quilt from Build-Depends in debian/control.
* Re-enabled tests:
  - uncommented test command in debian/rules;
  - uncommented previously missing build-dependencies in debian/control.
  - Re-enabled tests and uncommented build-dependencies accordingly.
* Removed libmodule-build-perl and libtest-harness-perl from
  Build-Depends-Indep (provided by perl-modules).
* Better cleaning of empty directories using find -type d -empty -delete
  instead of rmdir in debian/rules (LP: #324001).

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Lines of Context:
t/data/transfac_pro/fragment.dat
 
1
VV  TRANSFAC FRAGMENT TABLE, Release 11.1 - licensed - 2007-03-31, (C) Biobase GmbH
 
2
XX
 
3
//
 
4
AC  FR0000001
 
5
XX
 
6
ID  FR0000001
 
7
XX
 
8
DT  5.0.h2el(ct2a)k0. ;055d re
 
9
DT  tp5. )00m0e22 d5d;ul.a(k.5
 
10
CO  Copyright (C), Biobase GmbH.
 
11
XX
 
12
OS  human, Homo sapiens
 
13
OC  eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia; eutheria; primates
 
14
XX
 
15
SQ  TGGGCTCCTGGCATCGTTTACGCGAGCTGGTTCCAGGAAAGGCACCTCGGTTCATGCGAG
 
16
SQ  GCGCTGATTCTATTGTGTAAACTGTTTCGAGTGACTAGGCCACGAAACCTTTTCATGTAA
 
17
SQ  GGTGAATTGGGGGTTTTCATTTAACGCGGGGTACGGTTCGTTGGTGGGAAGTGGTTTCGG
 
18
SQ  ATGTAACGTGGTACGTCGGATATATTGCATGGATTAATACGAAGACGCTCGAGAAAGTCG
 
19
SQ  AGAGTACAGAAAGTTAAACCGCGGGTTTACGAAAGCATAACTAAAGAAGGTAAATTGATA
 
20
SQ  GATTCACAGAATGCGGTTGTATGAAACCTATTGACAGCGTCCGTTCGTGCGTTAGATGGT
 
21
SQ  GTTCTGCGGGGTTCAATATCATGTGAGCGGTCGTGAGGGCAGTTATCGATACTACATGTG
 
22
SQ  TCGGGGGGCATGCGCTCACCGACTTATCATGGCGGGTACGAACGAACGGGAATCGGATTG
 
23
SQ  AGGAGGAGCAAAGGATTAGAATTAAAGAGCGGACTTACTGATGGTTCAGACCGTCGTCTT
 
24
SQ  ACAACAACATCGTATGCTACTGGGAAGTATCAGCTCATCGGGTGGCGATCACGAGAATCG
 
25
SQ  AAACATACATTGTCTATGTACTGGCGGATCAAAACCCATTCAGTATATACTAGGTTTTTG
 
26
SQ  TTCGGACTAGCTGGCTGTGCGTACGCCATTGGAGACAACAGTCCGTGGGCAATGCTACAT
 
27
SQ  AAGTGGGATTGGCGACTGTGGTCGCCCAGACAACCGGAGCAAGACTGTCCTGTTTCCGGA
 
28
SQ  CTTAGGGGAGTAAGGCGCTACAGCTAGGGATCATTAGGCAGAATAGGCAATAATCAGCAT
 
29
SQ  TTTGACTGGGTTATATCACAACCAAACGGGTGTAGGAGGGGCCGAGATCATATAGTGAGG
 
30
SQ  GAGATTTTCCTTGTATGTAGGCTGCATATTATCATTACGGACGTGACTTATTAAATCCAG
 
31
SQ  TATTCATATAACACGAACCCTACCAGAGTGAGTCGAACCTAGTGTTTTGATAAGTGTAAT
 
32
SQ  TAAATTCTTGCTCGTCGCTTAATTGTGGACCATGTACAGTGATGTACTCATTTAATCGGG
 
33
SQ  TTTGCTCGATGGGCACACTGGCCGCAAAATTAGGGTTACTCCTCAGTAGCCAT
 
34
XX
 
35
SC  uRr. d0.)140H 1R1O6iF.621W40D.6(AS_620C:lh7y0a8MA1 7B 1
 
36
XX
 
37
BF  T00140; c-Myc; Quality: 6; Species: human, Homo sapiens; Cellular source: 0123, Jurkat.
 
38
XX
 
39
MM  h hruCgnded -a-IntiehPothilo re-cysyacginriloo
 
40
XX
 
41
DR  (:94B9L3AM:39F3)8; .5114E.12 80 695
 
42
RN  [1]; RE0035138.
 
43
RX  PUBMED: 14980218.
 
44
RA  o,r.emWCVmaTkog.J,r Tk. kwls a  o,r laWtneSsihB, at ek aPmrG   aSlnRR.m ,l. eA knK Soa..hu   nn.SuiAlHl,nn,  BeEe.PKGi.bA iKviaraCea.l ,e,Mahw taeeJ, ygp..,r . o.nS,a B,aH,a t oWk Y ., .S ipnrS  cDP eg H,vNb..e,..l,ngcJDegma, H  m rahen.i.ceroe n.
 
45
RT  iedgmisnnrNdngcpbor smr2ittlpocasiep.ei ogdanoft gAaoo nt2Uud ndp i iasfpu r taw  mo n ninsnsfngnlaoimtboot2cec  dR er anarn o hsosoiieas1h
 
46
RL  -10.542(69 9C)el0l1: 049
 
47
RN  [2]; RE0035139.
 
48
RX  PUBMED: 11988577.
 
49
RA    k a,rv    eeE.k.G rePaolL,gnJrR,rgvwBKsr,.S na r .ebuoPai..n., a,Fr .. eDsTwo od yStn..ipR oaSCS
 
50
RT  ntcaostccid sir1ntra  aevyo rn-la msago.mlLtr p2o2esehina 2ici
 
51
RL  e01ic0269 2 S6ec:-1992n.9()
 
52
XX
 
53
//
 
54
AC  FR0002267
 
55
XX
 
56
ID  FR0002267
 
57
XX
 
58
DT  )er2.. 0;00aet9cd(0hl5 .k7
 
59
DT  0m00  07.p.2dl;ae)5(9.ktud
 
60
CO  Copyright (C), Biobase GmbH.
 
61
XX
 
62
DE  Gene: G020751; Gene: G020752.
 
63
XX
 
64
OS  human, Homo sapiens
 
65
OC  eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia; eutheria; primates
 
66
XX
 
67
SQ  gtggcgggcctctataacgtacacggctccgctgggccttcccgctgtaaaccgggaatt
 
68
SQ  acgtcgagaggtgcaaggtgaaaccaccgactgaccccggccggagaccggagcagcgca
 
69
SQ  ctccgtcccaactacatgctgttcctgccacatgcaagcgttccctagtgaatctcgcgg
 
70
SQ  cgggactggcgcattacgcgcactccggtttcgagcgcggtcacaaccttacgttttacc
 
71
SQ  gcgttggttatgaccggtggtatgcggcgccggtgctgggcagatcagggtggtttcgct
 
72
SQ  gtcccattcatgcctccgatttctccactccaacgtctcctcagatgttacctcgtcatg
 
73
SQ  atcgcatacggtctgcgtagtatgggtcaccgatccggaatgcacgcgatgctgagcgtt
 
74
SQ  atgtacgcccgaccgtgcctgcttaccccccgcgcggaagacggcggctgttgcgttctg
 
75
SQ  GTCTACAACtGaCctActGcCtCAAGCCCcGATcCCcCctgGCAAcCGcTcGAaCcTCGt
 
76
SQ  ACTCTTGCGGACGGAGAGCCGAAGAGCAAAGCGTCGCCGGGTAAGACGAACGCTCAAGGG
 
77
SQ  GGTACGAGCAGCGTAACGACGGAAACGGTGACGCCCCGGGATTTGGGGCTCAGCTAGGGT
 
78
SQ  CGCCGAGTAGGGGGCCGCGGGGACAACGGGGGCGACACGCCGCTTTCCCTGCGTCTGTGG
 
79
SQ  AGCCTATGGTACGGCGTAACCGGTTGTGTGATGAACTGTCCAGACCGCACGTAGTCCCAG
 
80
SQ  CGCAAGGTCTATGCCGCCTAGAGGCAAGACGGGCCGTCTCCTACTTAGTAGCCAGCTACG
 
81
SQ  GGGCGTTGGTCCCCTCGGTAGTGCAACTATCCAGCCACGGCGTCCGCCGGGCTGAGCCTC
 
82
SQ  AGCAGAGCTGGGGGGGTATCATTCCGACGCTGTTTAATTCGTCAGCAGGACCCACTACAC
 
83
SQ  GCTCTGTCATTCGCCTGAGCAGTTGTAAATTAGCGCGGCGATCTTGCAAGAGACAAGGAG
 
84
SQ  GCGAACCTGGGGTCGGGACGTAAGGACGAACGGCAGTACAGACGCTGGGGGACGCCACGT
 
85
SQ  GCCAGAACCTCTCACGACCGGAGGTTCAACGCTGATTGGGGCGCAACAGAGGGCGGAGCA
 
86
SQ  GCGAGGTGGCGCTGGTGGGATGGGGCGAGACAAACCCAAGCTGACGCCGAAGGGCCCGCG
 
87
SQ  TGGCCGGGCTGGGGCCCGTAGAACGAGGGAATTGTATGCGGCGCCTGAATGGGCGCACCA
 
88
SQ  tCAgTCTTaGcacTCcCGCATTcTtcATcACaCtcACcCAtctAaggGAAcTaCGCCgGT
 
89
SQ  gctaagcaaggagtcgatcaacggaaaggtgctaggggtaactgggtcttgcgcggcagc
 
90
SQ  cgtgtactcggcttgtaacgacaccgcgactgtaagcgccctacttgcgtatattaacgt
 
91
SQ  aatgttttagtatagttcgttttatctcatctcatgagcttgttttgttgtgtctcgttt
 
92
SQ  tcgttttttttattttgtttttcgtttttttttttctttgtgtctatcgttcattttttt
 
93
SQ  ttatagtggacgcccctgggtagtgcgctcgggcctgtcggagatctcgtccaacgtctc
 
94
SQ  tatcactgctagtgttgccaagcttgctgtaactgaagcggacagtcccacccccactcc
 
95
SQ  ttaagtaagtagacttattccgtttgttttccgttagcgtcccgaagcggtttgaataac
 
96
SQ  ctcgtgcacccgaatactgctatacacatgactaaccaggtcctcccgtgtgcccc
 
97
XX
 
98
SC  30997.0aADHBrM346. d68 .9(y4 iS:W.2lA2F2RC hROu4_77)48
 
99
XX
 
100
BF  T03828; HNF-4alpha; Quality: 6; Species: human, Homo sapiens; Cellular source: 2614, hepatocytes.
 
101
XX
 
102
MM  yCrtea IropnPhr-or-moa
 
103
XX
 
104
DR   M8C081A09:(78:1E 1.6;8L488)B3 
 
105
RN  [1]; RE0023998.
 
106
RX  PUBMED: 14988562.
 
107
RA  rgSM,k .z, .E l.dBopf dn. ..,,f.A..seL  bo .aG. mHKJ l.e.e T  R.tPeR , rlIOAeoGy ,.lG DneZ.l Gc.o B.lJF rNdfe, i,.il Wh rR,erd,,oB.Tro.n ana  li rr. D  YeliL ,erN uVg or. Diuk 
 
108
RT  aF lnn ee tscfH bt  eNarseeorc npsarr prnsCsdnaioooei vonnlit partogycir.xf
 
109
RL  7i3)1S088e 1:n4c0-ce20(3.1 33
 
110
XX
 
111
//