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  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2009-03-10 07:19:11 UTC
  • mfrom: (1.2.3 upstream)
  • Revision ID: james.westby@ubuntu.com-20090310071911-fukqzw54pyb1f0bd
Tags: 1.6.0-2
https://launchpad.net/bugs/324001
* Removed patch system (not used):
  - removed instuctions in debian/rules;
  - removed quilt from Build-Depends in debian/control.
* Re-enabled tests:
  - uncommented test command in debian/rules;
  - uncommented previously missing build-dependencies in debian/control.
  - Re-enabled tests and uncommented build-dependencies accordingly.
* Removed libmodule-build-perl and libtest-harness-perl from
  Build-Depends-Indep (provided by perl-modules).
* Better cleaning of empty directories using find -type d -empty -delete
  instead of rmdir in debian/rules (LP: #324001).

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Bio/Tree/RandomFactory.pm
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# $Id: RandomFactory.pm,v 1.18.4.1 2006/10/02 23:10:37 sendu Exp $
 
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# $Id: RandomFactory.pm 11480 2007-06-14 14:16:21Z sendu $
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#
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# BioPerl module for Bio::Tree::RandomFactory
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#
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  use Bio::Tree::RandomFactory
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  my @taxonnames;
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  my $factory = new Bio::Tree::RandomFactory( -taxa => \@taxonnames,
 
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  my $factory = Bio::Tree::RandomFactory->new( -taxa => \@taxonnames,
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                                              -maxcount => 10);
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  # or for anonymous samples
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  my $factory = new Bio::Tree::RandomFactory( -num_taxa => 6,
 
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  my $factory = Bio::Tree::RandomFactory->new( -num_taxa => 6,
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                                              -maxcount => 50);
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=head2 new
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 Title   : new
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 Usage   : my $factory = new Bio::Tree::RandomFactory(-samples => \@samples,
 
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 Usage   : my $factory = Bio::Tree::RandomFactory->new(-samples => \@samples,
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                                                      -maxcount=> $N);
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 Function: Initializes a Bio::Tree::RandomFactory object
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 Returns : Bio::Tree::RandomFactory