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  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2008-03-18 14:44:57 UTC
  • mfrom: (4 hardy)
  • mto: This revision was merged to the branch mainline in revision 6.
  • Revision ID: james.westby@ubuntu.com-20080318144457-1jjoztrvqwf0gruk
http://bugs.debian.org/448890
* debian/control:
  - Removed MIA Matt Hope (dopey) from the Uploaders field.
    Thank you for your work, Matt. I hope you are doing well.
  - Downgraded some recommended package to the 'Suggests' priority,
    according to the following discussion on Upstream's mail list.
    http://bioperl.org/pipermail/bioperl-l/2008-March/027379.html
    (Closes: #448890)
* debian/copyright converted to machine-readable format.

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t/data/U83300.bsml
 
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<?xml version="1.0" encoding="UTF-8"?>
 
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<?format DECIMAL="."?>
 
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<!DOCTYPE Bsml PUBLIC "-//EBI//Labbook, Inc. BSML DTD//EN" "http://www.ebi.ac.uk/xembl/dtd/BSML2_2.DTD">
 
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<!-- The BSML specification was created by Joseph H. Spitzner, Ph.D., LabBook, Inc. http://www.labbook.com -->
 
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<Bsml>
 
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 <Definitions>
 
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  <Sequences>
 
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   <Sequence id="MIVN83300" ic-acckey="U83300" title="MIVN83300" comment="Veniliornis nigriceps strain LSU1305 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds. " length="946" topology="linear" molecule="dna">
 
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    <Attribute name="version" content="U83300.1" />
 
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    <Attribute name="organism-species" content="Veniliornis nigriceps (bar-bellied woodpecker)" />
 
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    <Attribute name="organism-classification" content="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archosauria; Aves; Neognathae; Piciformes; Picidae; Veniliornis" />
 
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    <Attribute name="source" content="Veniliornis nigriceps LSU1305" />
 
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    <Attribute name="date-created" content="14-MAY-1997" />
 
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    <Attribute name="date-last-updated" content="4-MAR-2000" />
 
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    <Attribute name="database-xref" content="UniProt/TrEMBL:O03345" />
 
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    <Attribute name="database-xref" content="GOA:O03345" />
 
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    <Feature-tables>
 
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     <Feature-table>
 
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      <Reference>
 
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       <RefAuthors>Moore W.S., DeFilippis V.R.</RefAuthors>
 
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       <RefTitle>The window of taxonomic resolution for phylogenies based on mitochondrial cytochrome b</RefTitle>
 
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       <RefJournal>(in) Mindell D.R. (eds.). AVIAN MOLECULAR EVOLUTION AND SYSTEMATICS:81-116. Academic Press, Inc., San Diego, CA, USA (1997)</RefJournal>
 
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      </Reference>
 
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      <Reference>
 
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       <RefAuthors>Moore W.S., DeFilippis V.R.</RefAuthors>
 
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       <RefJournal>Submitted (27-DEC-1996) to the EMBL/GenBank/DDBJ databases. Biological Sciences, Wayne State University, Biological Sciences Building, Detroit, MI 48202, USA</RefJournal>
 
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      </Reference>
 
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      <Feature id="FTR_U83300.1_0" class="SOURCE" value-type="source" title="source" display-auto="1">
 
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       <Qualifier value-type="strain" value="LSU1305" />
 
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       <Qualifier value-type="organelle" value="mitochondrion" />
 
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       <Qualifier value-type="organism" value="Veniliornis nigriceps" />
 
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       <Qualifier value-type="db_xref" value="TAXONOMY:56076" />
 
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       <Interval-loc startpos="1" endpos="946" />
 
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      </Feature>
 
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      <Feature id="FTR_U83300.1_1" class="CDS" value-type="cds" title="CDS" display-auto="1">
 
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       <Qualifier value-type="product" value="cytochrome b" />
 
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       <Qualifier value-type="codon_start" value="1" />
 
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       <Qualifier value-type="translation" value="XFGSLLGICLMTQIVTGLLLATHYTADTTLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLFKETWNTGVILLLTLMATAFVGYVLPWGQMSSWGATVITNLFSALPYVGQTIVEWAWGGFSVDNPTLTRFFXLHFLLPFLIXGLTLIHFTFLHESGSNNPLGIVSDXDKIPFXPYFSXKDILGFMFMLLPLVXLALFSPNLLGDXENXTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLAPLLHTSKQRTMAFRPFSQLLFWMLVANLLILTWIGXQPXEHP" />
 
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       <Qualifier value-type="db_xref" value="GOA:O03345" />
 
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       <Qualifier value-type="db_xref" value="UniProt/TrEMBL:O03345" />
 
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       <Qualifier value-type="db_xref" value="PID:AAB53618.1" />
 
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       <Interval-loc startpos="1" endpos="946" startopen="1" endopen="1" />
 
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      </Feature>
 
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     </Feature-table>
 
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    </Feature-tables>
 
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    <Seq-data>aantttggatctctcctaggcatttgcctaataacacaaattgtcacagg
 
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cctcctgcttgccacccactacactgccgacacaaccctagccttttctt
 
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ccgtcgcccatacatgccgcaacgttcaatacggctgactaatccgtaac
 
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ctccatgccaacggggcctcattctttttcatctgcatctacttacacat
 
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cggacgtggattctactacggatcctacttatttaaagaaacttgaaaca
 
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cgggagtcatccttctcctcaccctcatagccaccgccttcgtcggctac
 
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gtcctcccctgaggacaaatatcatcctgaggagcaaccgttattacaaa
 
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tttattctcagccctcccctacgtaggacaaactatcgtcgaatgagcct
 
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gaggaggattctctgtagacaaccccactctcacccgattcttcgnccta
 
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cactttctcctcccattcttaattgnaggactcaccctaattcacttcac
 
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tttcctccacgaatccggntcgaacaatcccctcggaatcgtatccgaca
 
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gngataaaatcccctttcanccctacttctccntaaaagatatcctagga
 
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ttcatattcatactcctccccctcgtnnccctagcnctattctcacctaa
 
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cctcctaggagaccnggaaaatttnacgcccgcaaaccccctagtnacac
 
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ccccccacatcaaaccagaatggtacttcctatttgcatatgctatccta
 
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cgctcaatccccaataaactaggaggagtcctagccctagctgcctcagt
 
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cctaattctattcctagcccccctccttcatacatccaaacaacgcacga
 
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tagccttccgacccttttcccaactcctattctgaatactagtcgccaac
 
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ctcctcatcctcacctgaatcggnagncaaccagnagaacatccct
 
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</Seq-data>
 
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   </Sequence>
 
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  </Sequences>
 
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 </Definitions>
 
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</Bsml>