~ubuntu-branches/ubuntu/raring/bioperl/raring

« back to all changes in this revision

Viewing changes to t/data/mixedmast.dat

  • Committer: Bazaar Package Importer
  • Author(s): Charles Plessy
  • Date: 2008-03-18 14:44:57 UTC
  • mfrom: (4 hardy)
  • mto: This revision was merged to the branch mainline in revision 6.
  • Revision ID: james.westby@ubuntu.com-20080318144457-1jjoztrvqwf0gruk
* debian/control:
  - Removed MIA Matt Hope (dopey) from the Uploaders field.
    Thank you for your work, Matt. I hope you are doing well.
  - Downgraded some recommended package to the 'Suggests' priority,
    according to the following discussion on Upstream's mail list.
    http://bioperl.org/pipermail/bioperl-l/2008-March/027379.html
    (Closes: #448890)
* debian/copyright converted to machine-readable format.

Show diffs side-by-side

added added

removed removed

Lines of Context:
 
1
********************************************************************************
 
2
MAST - Motif Alignment and Search Tool
 
3
********************************************************************************
 
4
        MAST version 3.5.3 (Release date: 2006-04-30 01:41:24 -0700 (Sun, 30 Apr 2006))
 
5
 
 
6
        For further information on how to interpret these results or to get
 
7
        a copy of the MAST software please access http://meme.nbcr.net.
 
8
********************************************************************************
 
9
 
 
10
 
 
11
********************************************************************************
 
12
REFERENCE
 
13
********************************************************************************
 
14
        If you use this program in your research, please cite:
 
15
 
 
16
        Timothy L. Bailey and Michael Gribskov,
 
17
        "Combining evidence using p-values: application to sequence homology
 
18
        searches", Bioinformatics, 14(48-54), 1998.
 
19
********************************************************************************
 
20
 
 
21
 
 
22
********************************************************************************
 
23
DATABASE AND MOTIFS
 
24
********************************************************************************
 
25
        DATABASE /home/struckma/XXXXX/xxxxx.seq.fasta (nucleotide)
 
26
        Last updated on Tue Jul 11 18:30:00 2006
 
27
        Database contains 4390 sequences, 173499994 residues
 
28
 
 
29
        Scores for positive and reverse complement strands are combined.
 
30
 
 
31
        MOTIFS test2.fasta.meme.out (peptide)
 
32
        MOTIF WIDTH BEST POSSIBLE MATCH
 
33
        ----- ----- -------------------
 
34
          1    15   SQTTICRFEALQLSF
 
35
          2    15   LEKEVVRVWFCNRRQ
 
36
          3    15   FKQRRIKLGFTQADV
 
37
          4    15   KNMCKLKPLLQKWLE
 
38
 
 
39
        PAIRWISE MOTIF CORRELATIONS:
 
40
        MOTIF     1     2     3
 
41
        ----- ----- ----- -----
 
42
           2   0.12
 
43
           3   0.15  0.14
 
44
           4   0.21  0.19  0.17
 
45
        No overly similar pairs (correlation > 0.60) found.
 
46
 
 
47
        Random model letter frequencies (from non-redundant database):
 
48
        A 0.070 C 0.024 D 0.040 E 0.052 F 0.040 G 0.074 H 0.029 I 0.041 K 0.052 
 
49
        L 0.096 M 0.017 N 0.032 P 0.065 Q 0.042 R 0.067 S 0.084 T 0.052 V 0.059 
 
50
        W 0.016 Y 0.022 
 
51
********************************************************************************
 
52
 
 
53
 
 
54
********************************************************************************
 
55
SECTION I: HIGH-SCORING SEQUENCES
 
56
********************************************************************************
 
57
SEQUENCE NAME                      DESCRIPTION           FRAME   E-VALUE  LENGTH
 
58
-------------                      -----------           -----   -------- ------
 
59
chr04q                                                       c    3.3e-26 6776397
 
60
chr02q                                                       b    9.1e-20 8059593
 
61
 
 
62
********************************************************************************
 
63
 
 
64
 
 
65
 
 
66
********************************************************************************
 
67
SECTION II: MOTIF DIAGRAMS
 
68
********************************************************************************
 
69
SEQUENCE NAME                      E-VALUE   MOTIF DIAGRAM
 
70
-------------                      --------  -------------
 
71
chr04q                              3.3e-26  170163_[-3a]_45546_[+4a]_316730_
 
72
                                             [+2c]_6917_[-1b]_46576_[+2c]_
 
73
                                             112087_[-4a]_106122_[-3a]_54413_
 
74
                                             [-3c]_2646_[-3c]_55292_[-1b]_
 
75
                                             229973_[-1a]_168811_[+1b]_320302_
 
76
                                             [+3c]_36_[+1c]_192_[+4c]_879_
 
77
                                             [+2c]_15041_[+4b]_12578_[+2a]_
 
78
                                             15085_[-2b]_34466_[-2a]_3572_
 
79
                                             [-3c]_106732_[-4a]_100884_[-1a]_
 
80
                                             150814_[+2b]_50394_[-2b]_2709_
 
81
                                             [+1b]_80737_[-2c]_9981_[+4c]_
 
82
                                             134258_[+2b]_5742_[+2b]_9723_
 
83
                                             [-1b]_120512_[-2a]_180_[+2a]_
 
84
                                             53270_[-4c]_17749_[-2a]_105178_
 
85
                                             [-1b]_47045_[-2a]_86702_[+2c]_
 
86
                                             6448_[-4a]_10586_[-2c]_30988_
 
87
                                             [-2a]_125990_[-2c]_69247_[-4a]_
 
88
                                             250534_[-2b]_143429_[-2a]_41053_
 
89
                                             [-4b]_167542_[-1c]_126920_[-2b]_
 
90
                                             79648_[-2c]_41344_[-1a]_34611_
 
91
                                             [-1a]_32643_[-2a]_69929_[+1c]_
 
92
                                             20774_[+1b]_62113_[+2c]_23189_
 
93
                                             [-4b]_9299_[-4a]_39496_[+1b]_
 
94
                                             43277_[-2a]_116690_[+4c]_6861_
 
95
                                             [+4c]_71133_[+2c]_143200_[-2a]_
 
96
                                             382714_[+1b]_15009_[+3b]_167995_
 
97
                                             [-3c]_11445_[+3c]_85905_[-2c]_
 
98
                                             116003_[+2b]_62888_[-3a]_64899_
 
99
                                             [+2a]_49005_[+2a]_56736_[+3a]_
 
100
                                             14883_[+2a]_6123_[-2a]_24729_
 
101
                                             [-2a]_75491_[-2c]_33025_[+2a]_
 
102
                                             223953_[+2a]_3536_[+2c]_57658_
 
103
                                             [+1a]_321010_[-2b]_99474_[+4b]_
 
104
                                             14568_[+4b]_14260_[-2c]_151646_
 
105
                                             [-4b]_91790_[-2a]_60756
 
106
chr02q                              9.1e-20  181586_[+1c]_84138_[-3c]_15167_
 
107
                                             [-2b]_135571_[-4c]_325471_[+4a]_
 
108
                                             12798_[-4a]_4700_[-2c]_182142_
 
109
                                             [-1c]_7912_[-1a]_80644_[-2b]_
 
110
                                             143591_[-2a]_5286_[-1a]_17554_
 
111
                                             [-4b]_104512_[+2c]_75992_[-2b]_
 
112
                                             1994_[+2a]_7759_[-2b]_11678_[+4a]_
 
113
                                             544_[+2b]_15348_[+2b]_53558_[+2a]_
 
114
                                             756_[-2a]_132170_[-3c]_6820_[+1a]_
 
115
                                             226852_[+2b]_107962_[+1c]_5949_
 
116
                                             [-2c]_138458_[-4b]_133762_[+1c]_
 
117
                                             126753_[-2c]_69234_[+1c]_33_[+1c]_
 
118
                                             72_[+1c]_150_[+1c]_33_[+1c]_72_
 
119
                                             [+1c]_267_[+1c]_33_[+1c]_15489_
 
120
                                             [-1c]_21704_[+1b]_72_[+1b]_346_
 
121
                                             [+1c]_96059_[-4b]_36498_[-2b]_
 
122
                                             335_[-4a]_[-1a]_155_[-3c]_18189_
 
123
                                             [-1c]_174870_[-2c]_38785_[+1a]_
 
124
                                             40123_[+2b]_147684_[-1b]_122397_
 
125
                                             [+2b]_45479_[+4a]_74846_[+1c]_
 
126
                                             23231_[+3b]_38245_[-4c]_152196_
 
127
                                             [-2c]_304660_[+2a]_165655_[-4b]_
 
128
                                             38440_[-4c]_21816_[+1c]_25500_
 
129
                                             [-2c]_336004_[+3a]_323232_[-4a]_
 
130
                                             7268_[+2c]_47044_[+4a]_41451_
 
131
                                             [-2a]_66303_[+2a]_30342_[+1a]_
 
132
                                             40657_[-4b]_180301_[-2c]_35205_
 
133
                                             [-2c]_59610_[-2c]_2222_[+1b]_
 
134
                                             1400_[-2a]_53171_[-2c]_175866_
 
135
                                             [-2c]_162426_[-2c]_70915_[+2a]_
 
136
                                             33010_[-1b]_139023_[+1b]_248403_
 
137
                                             [-2b]_102258_[+2b]_13294_[-4c]_
 
138
                                             85097_[+2b]_13395_[-4b]_217923_
 
139
                                             [-2b]_252830_[-2a]_40346_[-3c]_
 
140
                                             9779_[+1b]_15798_[-1b]_16835_
 
141
                                             [+1a]_31854_[-2a]_3867_[+2a]_
 
142
                                             28000_[+1b]_14934_[+2b]_18632_
 
143
                                             [+4a]_54520_[+2b]_53902_[+1c]_
 
144
                                             198948_[-2c]_10079_[+1b]_162971_
 
145
                                             [-2a]_106411_[+2b]_74994_[-4b]_
 
146
                                             11202_[-4b]_165552_[+2b]_7010_
 
147
                                             [-2a]_12481_[-2b]_23349_[+1b]_
 
148
                                             102412_[+2c]_100606_[-4a]_31326
 
149
 
 
150
********************************************************************************
 
151
 
 
152
 
 
153
 
 
154
********************************************************************************
 
155
SECTION III: ANNOTATED SEQUENCES
 
156
********************************************************************************
 
157
 
 
158
 
 
159
chr04q
 
160
  
 
161
  LENGTH = 6776397  COMBINED P-VALUE = 7.48e-30  E-VALUE =  3.3e-26
 
162
  DIAGRAM: 170163_[-3a]_45546_[+4a]_316730_[+2c]_6917_[-1b]_46576_[+2c]_112087_
 
163
           [-4a]_106122_[-3a]_54413_[-3c]_2646_[-3c]_55292_[-1b]_229973_[-1a]_
 
164
           168811_[+1b]_320302_[+3c]_36_[+1c]_192_[+4c]_879_[+2c]_15041_[+4b]_
 
165
           12578_[+2a]_15085_[-2b]_34466_[-2a]_3572_[-3c]_106732_[-4a]_100884_
 
166
           [-1a]_150814_[+2b]_50394_[-2b]_2709_[+1b]_80737_[-2c]_9981_[+4c]_
 
167
           134258_[+2b]_5742_[+2b]_9723_[-1b]_120512_[-2a]_180_[+2a]_53270_
 
168
           [-4c]_17749_[-2a]_105178_[-1b]_47045_[-2a]_86702_[+2c]_6448_[-4a]_
 
169
           10586_[-2c]_30988_[-2a]_125990_[-2c]_69247_[-4a]_250534_[-2b]_143429_
 
170
           [-2a]_41053_[-4b]_167542_[-1c]_126920_[-2b]_79648_[-2c]_41344_[-1a]_
 
171
           34611_[-1a]_32643_[-2a]_69929_[+1c]_20774_[+1b]_62113_[+2c]_23189_
 
172
           [-4b]_9299_[-4a]_39496_[+1b]_43277_[-2a]_116690_[+4c]_6861_[+4c]_
 
173
           71133_[+2c]_143200_[-2a]_382714_[+1b]_15009_[+3b]_167995_[-3c]_
 
174
           11445_[+3c]_85905_[-2c]_116003_[+2b]_62888_[-3a]_64899_[+2a]_49005_
 
175
           [+2a]_56736_[+3a]_14883_[+2a]_6123_[-2a]_24729_[-2a]_75491_[-2c]_
 
176
           33025_[+2a]_223953_[+2a]_3536_[+2c]_57658_[+1a]_321010_[-2b]_99474_
 
177
           [+4b]_14568_[+4b]_14260_[-2c]_151646_[-4b]_91790_[-2a]_60756
 
178
 
 
179
 
 
180
                                   [-3a]
 
181
                                   3.3e-07
 
182
                                   ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
183
                                        +  +  +  +  +     +     +     +        +
 
184
                                   ..T..D..T..Q..T..V..N..L..*..I..P..R..A..Q..F
 
185
170137  CAGAAAAATCGAAGACGAGTATAAAATTGTGTCAGTCTGAGTAACATTCAGCTAAATAGGTCTAGCTTGAAA
 
186
 
 
187
                                                  [+4a]
 
188
                                                  5.6e-07
 
189
                                                  K..N..M..C..K..L..K..P..L..L..
 
190
                                                  +        +     +  +     +  +
 
191
                                                  N..*..L..I..T..L..K..S..I..L..
 
192
215713  TGTGTGAAAGGATATGGCCTATGGCATCAATAGGACTGAATCAACTAGCTAATCACATTAAAAAGTATTCTA
 
193
 
 
194
        
 
195
        
 
196
        Q..K..W..L..E..
 
197
        +        +
 
198
        N..*..T..V..H..
 
199
215785  AATTAAACAGTACACAACACTGACAAATGCAAGCGAATTTATAGAATGTGTGAGCACTGAGCAGGATGTATA
 
200
 
 
201
                         [+2c]
 
202
                         6.2e-07
 
203
                         L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
204
                               +     +  +        +  +     +  +
 
205
                         V..H..K..K..V..V..K..C..W..F..S..N..R..N..N..
 
206
532513  AATCCTATTTATCGCATGTCCACAAAAAAGTTGTAAAATGTTGGTTTAGTAATAGAAACAACAAAGCTCTTT
 
207
 
 
208
                                                                           [-1b]
 
209
                                                                           8.7e-
 
210
                                                                           ..F..
 
211
        
 
212
                                                                           ..Y..
 
213
539425  TTTATTTTCTTTCAACTTGAGACGCTAATAGGAACACCGAGTGCTTATTGAAGAAACGTTCGAGTATGTATG
 
214
 
 
215
        
 
216
        07
 
217
        S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
218
        +  +        +     +     +  +  +  +     +
 
219
        T..I..K..T..S..S..F..N..S..I..A..T..Y..S
 
220
539497  TTATTTTAGTTGATGAGAAATTACTGATTGCAGTATATGACCTACTTCACATGTTATGCACCTATTATGTCA
 
221
 
 
222
                                        [+2c]
 
223
                                        9.6e-07
 
224
                                        L..E..K..E..V..V..R..V..W..F..C..N..R..R
 
225
                                           +  +     +  +  +        +  +     +
 
226
                                        R..K..K..K..V..V..R..R..D..F..C..G..R..E
 
227
586081  ACACACAAAGATATACGTCATAATCGTGAGAACGTAAGAAAAAGGTAGTAAGACGCGATTTCTGTGGTCGCG
 
228
 
 
229
        
 
230
        
 
231
        ..Q..
 
232
        
 
233
        ..R..
 
234
586153  AACGTTTAGTTTCTATTCCATTTTGGCAGAAGTTTAGAATTGTGATCTTACTAAGTATAACGGCAATCTTGT
 
235
 
 
236
                                                                    [-4a]
 
237
                                                                    8.5e-07
 
238
                                                                    ..E..L..W..K
 
239
                                                                      +        +
 
240
                                                                    ..N..T..L..K
 
241
698185  AGACGGAATGTCTCAGAATGCATCTTCGCACTAGTGCATACTTTTATATATATATATAGAGTTAGTCAGTTT
 
242
 
 
243
        
 
244
        
 
245
        ..Q..L..L..P..K..L..K..C..M..N..K
 
246
          +  +  +        +  +  +  +     +
 
247
        ..Q..L..I..V..M..L..K..I..A..Q..K
 
248
698257  TTGTAGTATCACCATCAGCTTTATGGCTTGTTTTTATTGTATGTACATTATACATGATATTTTATTGTAATG
 
249
 
 
250
                                   [-3a]
 
251
                                   3.8e-07
 
252
                                   ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
253
                                        +  +  +     +  +     +     +  +     +
 
254
                                   ..L..N..T..Q..K..V..G..*..K..G..R..R..L..K..G
 
255
804385  AATAAAATTATTAAATTACAACAAAAATAAATTTGTTTGTTTTACACCTCACTTACCTCTGCGTAACTTTCC
 
256
 
 
257
                                                             [-3c]
 
258
                                                             8.2e-08
 
259
                                                             ..V..D..A..Q..T..F.
 
260
                                                               +  +  +     +  +
 
261
                                                             ..V..Q..G..V..T..Y.
 
262
858817  CAACACACCTAAAAAAGTTATTTCTAGACATCTAGTGGTTTGTATAACCTATGTACCTGTCCTACAGTATAT
 
263
 
 
264
        
 
265
        
 
266
        .G..L..K..I..R..R..Q..K..F
 
267
         +     +     +           +
 
268
        .G..S..T..L..R..Y..L..*..F
 
269
858889  CCACTGGTAAGCCTGTATAACTAAAATAGAATGCGGAACAATTTTCATGGATGTACTTACTACATAGCTACC
 
270
 
 
271
                [-3c]
 
272
                3.6e-07
 
273
                ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
274
                     +     +     +  +     +  +  +  +        +
 
275
                ..Y..N..P..Q..Q..Y..G..F..T..I..R..K..R..H..F
 
276
861553  GTAAGGGTATAGTTTGGTTGCTGATAGCCGAAAGTAATTCTTTTGCGGTGGAAGTCGTAGTTTAGAAGCAAC
 
277
 
 
278
                                                         [-1b]
 
279
                                                         1.1e-07
 
280
                                                         ..F..S..L..Q..L..A..E..
 
281
                                                              +  +  +  +  +  +
 
282
                                                         ..L..S..L..D..L..A..E..
 
283
916849  ATTCCCATTGGCAGGAGCCAAGTATATCGAGTGTGTCGAGTTTAGATGATAAACTAAGGTCAAGTGCTTCTG
 
284
 
 
285
        
 
286
        
 
287
        F..R..C..I..T..T..Q..S
 
288
              +        +     +
 
289
        A..S..S..S..N..T..R..S
 
290
916921  CTGAAGAAGAATTAGTGCGTGATGTGTTATATTCTACAAGGCAAAATATCAACATTGTCCATGAGATGTTTC
 
291
 
 
292
                                   [-1a]
 
293
                                   5.7e-07
 
294
                                   ..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
295
                                     +  +  +           +  +        +     +     +
 
296
                                   ..P..S..I..K..R..T..E..F..S..P..I..*..T..R..S
 
297
1146889 CTTAATGAGCTTTGAATGACCGAAACTAGGAGATATTTTGCGGGTTTCGAAACTCGGAATTCACGTGCGTGA
 
298
 
 
299
                                                   [+1b]
 
300
                                                   3.7e-07
 
301
                                                   S..Q..T..T..I..C..R..F..E..A.
 
302
                                                   +     +     +     +  +     +
 
303
                                                   S..F..T..S..I..V..R..F..T..N.
 
304
1315729 GAACGATTAAACTAGATAAACAACAGCTGACGTGAAATTCTGTTCTTTCACTTCGATCGTAAGATTCACTAA
 
305
 
 
306
        
 
307
        
 
308
        .L..Q..L..S..F..
 
309
            +     +  +
 
310
        .Y..D..A..T..F..
 
311
1315801 CTATGACGCAACTTTCTTCTTCGGTTTTGATTGGCTTGATTTCATGAAACGGAAATTACATCAAAAAATGGC
 
312
 
 
313
                                                                      [+3c]
 
314
                                                                      1.1e-16
 
315
                                                                      F..K..Q..R
 
316
                                                                      +  +  +  +
 
317
                                                                      F..K..Q..K
 
318
1636057 TTGATGTGGCTTTTTAGGAAGAAGCAAAGCAGTTGGAGCAGCTGGAACTTTTCGCGAAGGATTTCAAGCAGA
 
319
 
 
320
                                                                               [
 
321
                                                                               6
 
322
        ..R..I..K..L..G..F..T..Q..A..D..V..                                    S
 
323
          +  +  +     +  +  +  +  +  +  +                                      +
 
324
        ..R..I..K..M..G..F..T..Q..G..D..V..                                    S
 
325
1636129 AGCGAATTAAGATGGGGTTTACTCAGGGTGATGTTGGACAAGCAATGGGTTGTCTGTATGGCAATGATTTCA
 
326
 
 
327
        +1c]
 
328
        .3e-15
 
329
        ..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
330
          +  +  +  +  +  +  +  +  +  +  +  +     +
 
331
        ..Q..T..T..I..S..R..F..E..A..L..N..L..R..F..
 
332
1636201 GTCAAACCACCATTTCAAGATTTGAAGCACTGAACTTGAGGTTTGTTTGTTCAGTTGGAGTCTTAGTTTTGT
 
333
 
 
334
                            [+4c]
 
335
                            1.8e-13
 
336
                            K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
337
                            +  +  +  +  +  +  +  +     +  +  +  +  +
 
338
                            K..N..M..I..K..L..K..P..M..L..E..R..W..L..L..
 
339
1636417 ATTGATCATTACACAGCTTTAAAAATATGATCAAGCTGAAGCCCATGCTAGAAAGATGGTTGCTGGATGCTA
 
340
 
 
341
                [+2c]
 
342
                2.1e-20
 
343
                L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
344
                +  +  +  +  +  +  +  +  +  +  +  +  +  +  +
 
345
                M..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
346
1637353 AATGTAAAATGGAGAAGGAGGTAGTTCGTGTTTGGTTTTGCAACCGACGGCAAAAGCAAAAGAGAATATCGC
 
347
 
 
348
                                                      [+4b]
 
349
                                                      6.1e-07
 
350
                                                      K..N..M..C..K..L..K..P..L.
 
351
                                                      +  +  +     +           +
 
352
                                                      N..S..A..*..K..I..I..C..L.
 
353
1652401 TATAAATGGCACATTTTAAAAGTTAACAGATTATCATAAAAAATAGAATTCTGCTTGAAAAATAATATGTTT
 
354
 
 
355
        
 
356
        
 
357
        .L..Q..K..W..L..E..
 
358
            +  +  +  +  +
 
359
        .T..S..K..W..V..E..
 
360
1652473 GACATCAAAGTGGGTTGAGTTTTTAGGCACACTTTTGTTTGTATTAGAGGATTAACTTAATGATATTTAAAC
 
361
 
 
362
                                                                             [+2
 
363
                                                                             6.2
 
364
                                                                             L..
 
365
                                                                             +
 
366
                                                                             Y..
 
367
1665001 CAATTCGCCCCGCACCCTATATATAAATATAACGCATTAACTTACGTGCATGAAATAAATTTCTTATGCTAT
 
368
 
 
369
        a]
 
370
        e-07
 
371
        E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
372
           +     +  +     +     +     +  +
 
373
        *..R..L..V..I..A..V..C..F..F..N..R..A..V..
 
374
1665073 TGAAGGCTCGTTATAGCAGTATGTTTTTTCAATCGAGCTGTGGCGGTTTTCGACAAAACTATATATACTGCA
 
375
 
 
376
               [-2b]
 
377
               2.7e-08
 
378
               ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
379
                          +     +  +  +  +  +  +  +
 
380
               ..N..S..S..N..Y..F..W..V..R..V..V..E..M..F..R
 
381
1680193 AAAGAACATTCGAAGAATTATAAAACCATACCCTCACGACTTCCATAAACCGTTGTTTATTGTTTAAAACTT
 
382
 
 
383
                                      [-2a]
 
384
                                      1.4e-07
 
385
                                      ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E
 
386
                                                 +     +  +     +  +  +  +
 
387
                                      ..N..S..S..N..Y..F..W..I..R..V..V..E..M..F
 
388
1714681 TCACGTTCCATTTGGTAGTAAACAAAGAACATTCGAAGAATTATAAAACCATATCCTCACGACTTCCATAAA
 
389
 
 
390
        
 
391
        
 
392
        ..L
 
393
        
 
394
        ..R
 
395
1714753 CCGTTGTTTATTGTTTAAAACTTGATTAGGATATTTGAATATTAGGTTTCCCATCTTCCCCCACAGTACTAT
 
396
 
 
397
                                                       [-3c]
 
398
                                                       3.4e-07
 
399
                                                       ..V..D..A..Q..T..F..G..L.
 
400
                                                            +     +  +  +     +
 
401
                                                       ..I..D..R..Q..T..V..N..L.
 
402
1718281 GATGACCTTGAAAATGAAACCTTGACGTGACAGATTTATTCTTATTGTATGTCTCGTTGTGTAACATTAAGT
 
403
 
 
404
        
 
405
        
 
406
        .K..I..R..R..Q..K..F
 
407
         +  +     +
 
408
        .K..I..*..K..V..R..I
 
409
1718353 TTTATTTATTTAACCCTAATTTTAGCATTGTTGTACTCAAGGATTTTTACATTTTATTATTACTTAGTTGCG
 
410
 
 
411
                                                        [-4a]
 
412
                                                        4.4e-07
 
413
                                                        ..E..L..W..K..Q..L..L..P
 
414
                                                             +     +  +  +  +  +
 
415
                                                        ..R..V..R..K..S..L..V..P
 
416
1825057 AGACGTACAATGGGAAGCTTATAGAAACATTTAATTGGATGACCGTGTTCTCACACGTTTGCTTAAGACGGG
 
417
 
 
418
        
 
419
        
 
420
        ..K..L..K..C..M..N..K
 
421
             +     +  +     +
 
422
        ..D..L..T..V..M..R..N
 
423
1825129 ATCTAAGGTTACCATTCTATTCGAACGAAATTATTTATCAATTGAATCAGCCCTCGGAACTAAACAAACTGA
 
424
 
 
425
                                         [-1a]
 
426
                                         1.6e-07
 
427
                                         ..F..S..L..Q..L..A..E..F..R..C..I..T..T
 
428
                                              +  +  +        +  +     +  +     +
 
429
                                         ..S..S..L..N..Q..K..E..F..L..C..I..N..S
 
430
1926001 ACACTGCGTGTATGTCAAACAGATCTAAGTTTATGAACTCAAATTTTGTTTTTCAAATAGGCAAATATTTGA
 
431
 
 
432
        
 
433
        
 
434
        ..Q..S
 
435
        
 
436
        ..L..W
 
437
1926073 TAACCAAAATTTCTCTTTTTAGGGTGGCAAAGGAGAGAAAGACAAAGGAAAAAAGAAGATTGGTGGAAGAGA
 
438
 
 
439
                                                            [+2b]
 
440
                                                            8.8e-07
 
441
                                                            L..E..K..E..V..V..R.
 
442
                                                                        +  +  +
 
443
                                                            R..S..M..G..V..V..R.
 
444
2076841 TTGAGCACAACATAATATTAAATTATCCTGATTGTGCTTAAACCATTAATAACGGTCTATGGGAGTCGTGAG
 
445
 
 
446
        
 
447
        
 
448
        .V..W..F..C..N..R..R..Q..
 
449
            +  +     +
 
450
        .I..W..F..Y..N..S..L..N..
 
451
2076913 AATATGGTTTTATAATTCATTAAATGTTTTTTGTTTACTACCAAATGGGACGAAAAAATAGGATGAAAAGGT
 
452
 
 
453
                           [-2b]
 
454
                           6.8e-07
 
455
                           ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
456
                                      +     +     +  +  +  +           +
 
457
                           ..F..L..S..N..Y..F..*..V..R..V..V..G..M..S..L
 
458
2127313 TTAGTAGTATACAAAGAACAAACAAAGAATTATAAAACTATACCCTCACTACTCCCATAGACAGTAGTTAAT
 
459
 
 
460
                                             [+1b]
 
461
                                             2.9e-07
 
462
                                             S..Q..T..T..I..C..R..F..E..A..L..Q.
 
463
                                                   +     +  +     +     +  +  +
 
464
                                             F..F..T..F..I..S..C..F..T..S..L..T.
 
465
2130049 TACAGCTTCAACTTTGATCTCCGGTTGATTTTCTTCTTTTTTCACCTTTATCTCTTGTTTTACTTCTTTAAC
 
466
 
 
467
        
 
468
        
 
469
        .L..S..F..
 
470
         +  +
 
471
        .L..S..L..
 
472
2130121 TTTATCTTTGGTTTGTTCATTTTCCACTTTTTTGGCAGTTTCTATATCAGGTTTACTTGTTTGTTGTTCTTC
 
473
 
 
474
                                           [-2c]
 
475
                                           3.7e-07
 
476
                                           ..Q..R..R..N..C..F..W..V..R..V..V..E.
 
477
                                                   +  +        +     +  +
 
478
                                           ..T..L..R..N..K..K..W..N..R..V..L..V.
 
479
2210833 AGAAGAGCGCAAGAAATTGCAAGATCTCAAACTAAAGTAAGCCGATTTTTTTTCCAATTCCGTACTAGAACC
 
480
 
 
481
        
 
482
        
 
483
        .K..E..L
 
484
         +  +  +
 
485
        .K..K..Y
 
486
2210905 TTCTTGTAGATATAGCTATTGCTGTCGAAATATGTACAAAACTCTTATTTAAACGGTACATTTTCCAGCAGA
 
487
 
 
488
                                                             [+4c]
 
489
                                                             5.1e-07
 
490
                                                             K..N..M..C..K..L..K
 
491
                                                             +        +     +  +
 
492
                                                             N..D..T..I..T..L..R
 
493
2220841 ATTATGTTTCTTTCCCTTTAAACTTCTTCAATATACAGTGTACGATACGCACGAATGACACAATAACACTGC
 
494
 
 
495
        
 
496
        
 
497
        ..P..L..L..Q..K..W..L..E..
 
498
             +  +  +     +
 
499
        ..L..L..L..A..H..W..S..K..
 
500
2220913 GACTATTATTGGCTCACTGGTCAAAATATTTTAGAATCTAAAACTTACATACAGAAACAATACAATAGCAGC
 
501
 
 
502
            [+2b]
 
503
            1.7e-08
 
504
            L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
505
                  +  +  +  +  +        +  +  +
 
506
            R..S..K..E..V..V..R..I..R..F..C..N..S..L..Y..
 
507
2355193 ACAACGGTCTAAGGAAGTCGTGAGGATACGATTTTGTAATTCTTTGTATGTTCTTTGTTTACTACCAAATGG
 
508
 
 
509
                                       [+2b]
 
510
                                       6.8e-07
 
511
                                       L..E..K..E..V..V..R..V..W..F..C..N..R..R.
 
512
                                       +  +     +  +        +  +  +
 
513
                                       L..K..G..E..V..L..S..V..W..F..A..R..S..I.
 
514
2360953 ACCAAAACCGCAAGCGGAATTCGCCTTCGGCTTGAAAGGGGAGGTTTTGTCGGTTTGGTTCGCAAGATCTAT
 
515
 
 
516
        
 
517
        
 
518
        .Q..
 
519
        
 
520
        .S..
 
521
2361025 TAGCGCGCTTTTAGGCTTTAGTTAATTCGATCAGCAGTTTTAATAAAATAAGCCCATTGCGAATTATACGCC
 
522
 
 
523
               [-1b]
 
524
               9.9e-07
 
525
               ..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
526
                 +  +        +  +     +     +  +  +  +
 
527
               ..H..T..Q..E..L..S..N..F..V..C..I..A..S..S..A
 
528
2370745 CAACGTCGTGTGTTTGCTCAAGGGAATTGAATACGCATATCGCAGACGAAGCTAAACAATGTCTGCCCTATA
 
529
 
 
530
                                            [-2a]
 
531
                                            8.7e-08
 
532
                                            ..Q..R..R..N..C..F..W..V..R..V..V..E
 
533
                                                       +     +  +  +  +  +  +
 
534
                                            ..N..S..S..N..Y..F..W..V..R..V..V..*
 
535
2491273 CTATTTTTTCGCTCCATTTGGTAGTAAACAGAGAGCATTCGAAGAATTATAAAACCATACTCTCACGACTCA
 
536
 
 
537
        
 
538
        
 
539
        ..K..E..L
 
540
        
 
541
        ..G..V..S
 
542
2491345 TCCCACAGACCGTTGTTAATTGTTTAAAACACAATCAGGATATTTCAACACTATGTGCTATAAAGGCGTCTC
 
543
 
 
544
                                                     [+2a]
 
545
                                                     8.7e-08
 
546
                                                     L..E..K..E..V..V..R..V..W..
 
547
                                                                 +  +  +  +  +
 
548
                                                     S..V..G..*..V..V..R..V..W..
 
549
2491489 ATAGTGTTGAAATATCCTGATTGTGTTTTAAACAATTAACAACGGTCTGTGGGATGAGTCGTGAGAGTATGG
 
550
 
 
551
        
 
552
        
 
553
        F..C..N..R..R..Q..
 
554
        +     +
 
555
        F..Y..N..S..S..N..
 
556
2491561 TTTTATAATTCTTCGAATGCTCTCTGTTTACTACCAAATGGAGCGAAAAAATAGAATAAAGGGGTGTCCGAT
 
557
 
 
558
                [-4c]
 
559
                3.8e-07
 
560
                ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
561
                  +        +     +  +           +     +  +
 
562
                ..E..M..K..K..*..L..I..S..V..I..K..N..M..N..*
 
563
2544841 AATTGCAATTCCATCTTCTTTTACAAAATTGACACGATTTTGTTCATGTTTTAGACATGAAAACTTTAATAT
 
564
 
 
565
                          [-2a]
 
566
                          9.6e-07
 
567
                          ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
568
                                           +  +  +     +  +        +  +
 
569
                          ..N..S..I..S..I..F..W..V..Y..V..V..K..D..K..L
 
570
2562625 ACAGCTATACAAAAGATGGTTGCTTATTGATATAAACCATACATAAACAACTTTGTCTTTCAAATTAAAGCG
 
571
 
 
572
                                                         [-1b]
 
573
                                                         4.4e-07
 
574
                                                         ..F..S..L..Q..L..A..E..
 
575
                                                              +     +  +     +
 
576
                                                         ..Y..S..T..Q..L..C..E..
 
577
2667817 ACTTCAAATGTGGGCGATTTATTGCCTGTTTAGTCTTGTGTTGGATAACATACGAAGTCTGCAAGCACTCAA
 
578
 
 
579
        
 
580
        
 
581
        F..R..C..I..T..T..Q..S
 
582
        +  +           +
 
583
        F..R..H..F..C..T..M..N
 
584
2667889 AGCGATGGAAACAAGTCATATTTTCATGGCAGTGGAAAATAACTGGTCTGGCTTTCGCCATAACTACGCTGA
 
585
 
 
586
                                                           [-2a]
 
587
                                                           2.1e-07
 
588
                                                           ..Q..R..R..N..C..F..W
 
589
                                                                      +  +  +
 
590
                                                           ..L..S..S..N..C..F..G
 
591
2714905 CACCTTTTTCTTTTAATTTCTAGTCACATTTAGAAGTAAACAGAGAACATTCAATGAAGAATTACAAAACCC
 
592
 
 
593
        
 
594
        
 
595
        ..V..R..V..V..E..K..E..L
 
596
             +  +  +           +
 
597
        ..I..R..V..V..G..M..P..L
 
598
2714977 TATCCTCACGACTCCCATAGGCAGTTGTTAATTGTTTAAAACACGATCAGGATATTTCGATATTATGTGTTA
 
599
 
 
600
                                              [+2c]
 
601
                                              9.6e-07
 
602
                                              L..E..K..E..V..V..R..V..W..F..C..N
 
603
                                                       +  +  +  +  +     +     +
 
604
                                              R..S..M..E..V..V..R..V..R..F..Y..N
 
605
2801665 TATTCAAATATCATGATCGTGTTTTAATCAATTACCAACGGTCTATGGAAGTCGTAAGGGTTCGGTTTTATA
 
606
 
 
607
        
 
608
        
 
609
        ..R..R..Q..
 
610
        
 
611
        ..S..L..N..
 
612
2801737 ATTCTTTGAACGTTTTTTGTTTACTAGCAAATGGGACGAGAAAATGTAACGAAAATGTGTCCCATCTTTACT
 
613
 
 
614
                                                           [-4a]
 
615
                                                           4.6e-07
 
616
                                                           ..E..L..W..K..Q..L..L
 
617
                                                                   +     +  +  +
 
618
                                                           ..L..S..W..L..S..L..V
 
619
2808145 GAAGATCAAATGCGAACTGCTTTGCTTTATGGTGAAATCTACAACGCTTGTTAAACTCCACAAACTTAACAC
 
620
 
 
621
        
 
622
        
 
623
        ..P..K..L..K..C..M..N..K
 
624
          +  +  +        +     +
 
625
        ..P..K..L..S..S..A..L..K
 
626
2808217 CGGCTTGAGCGAGCTTGCTAACTTTGGTGCCGCAGTTGTAATAGTCTCGATGTGACGGGCGCCACGGCTGCA
 
627
 
 
628
                                  [-2c]
 
629
                                  7.4e-07
 
630
                                  ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
631
                                             +     +  +     +  +  +
 
632
                                  ..N..L..S..N..Y..F..W..I..R..V..V..G..L..S..R
 
633
2818801 CCAATTTGTTCGTGAACAAAAAAAACATTCAAAGAATTATAAAACCATATTCTCACAACTCCCAAAGACCGT
 
634
 
 
635
                                   [-2a]
 
636
                                   4.3e-08
 
637
                                   ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
638
                                              +     +  +     +  +  +  +
 
639
                                   ..N..L..S..N..Y..F..W..I..R..V..V..E..M..Y..F
 
640
2849833 CATGTTATTTGGTAGTAAACAAAGAACATTCAAAGAATTATAAAACCATATCCTCACGACTTCCATATAGAA
 
641
 
 
642
                                                                      [-2c]
 
643
                                                                      6.0e-07
 
644
                                                                      ..Q..R..R.
 
645
        
 
646
                                                                      ..E..E..K.
 
647
2975833 TCCAGCACAACACACATGCCCAGGACAAGTTATTCACCAGAATTGCTGATAGTTACATTGCTCTCTTCTTTA
 
648
 
 
649
        
 
650
        
 
651
        .N..C..F..W..V..R..V..V..E..K..E..L
 
652
            +     +  +        +     +  +  +
 
653
        .T..C..M..W..V..Y..S..V..F..K..E..L
 
654
2975905 GTGCACATCCAGACATAAGAGACAAATTTTTCAAGGTAAATTTTTGGCTTGAAACTGTCAAATAAAAGTACA
 
655
 
 
656
                          [-4a]
 
657
                          6.1e-07
 
658
                          ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
659
                               +  +  +     +  +  +  +        +        +
 
660
                          ..V..V..W..K..R..L..I..A..R..T..S..C..C..E..N
 
661
3045169 TTCTATTCTTACACAACCTACCACCCATTTTCTTAATATAGCCCGAGTAGAACAACATTCGTTCTGTTGTTG
 
662
 
 
663
                                             [-2b]
 
664
                                             3.7e-07
 
665
                                             ..Q..R..R..N..C..F..W..V..R..V..V..
 
666
                                                        +     +  +     +  +
 
667
                                             ..N..S..Y..N..Y..F..W..I..R..V..L..
 
668
3295729 TTCCTTTTCTTGTCCCAATGGGTAGTAAACAAAGAGCATTCGAATAATTATAAAACCATATCCTCACGAGTC
 
669
 
 
670
        
 
671
        
 
672
        E..K..E..L
 
673
                 +
 
674
        G..M..Y..L
 
675
3295801 CCATATACAGTTGTTAATTGTTTATATCATGATCAGCATATTTGGATATTATGTACTAAAGGTGTCCCATCT
 
676
 
 
677
                       [-2a]
 
678
                       2.8e-07
 
679
                       ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
680
                                     +  +  +  +  +  +           +  +
 
681
                       ..C..G..*..C..C..F..W..V..R..V..C..Q..S..D..Y
 
682
3439225 TTGTTTTAGCCAAAAACAACCTTAACAACAAAACCATACCCTAACACACTGTGAATCATACATAATAATGCA
 
683
 
 
684
         [-4b]
 
685
         9.8e-07
 
686
         ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
687
              +  +     +     +  +           +  +  +  +
 
688
         ..K..L..W..L..Q..G..V..A..G..V..T..C..M..S..N
 
689
3480337 TTTTAAGCCACAGTTGACCTACTGCCCCCACTGTACACATGCTATTTATGGCGGATAGTTATTTGAGCCATT
 
690
 
 
691
                                                    [-1c]
 
692
                                                    5.5e-07
 
693
                                                    ..F..S..L..Q..L..A..E..F..R.
 
694
                                                      +  +        +        +
 
695
                                                    ..H..T..N..L..L..K..A..F..G.
 
696
3647881 CGCCACCGTTAGATTCCGATCTATATACCTAGGATTTGCCATAAATGTGTGTTTAGAAGTTTCGCGAAACCG
 
697
 
 
698
        
 
699
        
 
700
        .C..I..T..T..Q..S
 
701
         +  +  +        +
 
702
        .C..I..T..H..T..S
 
703
3647953 CAAATCGTGTGTGTAGATGCGTATCCCAATCCCCTGCTCTTTATCTCAAGATCCAGCGCTCGCTTGTCAATC
 
704
 
 
705
         [-2b]
 
706
         1.9e-07
 
707
         ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
708
                    +     +  +     +  +  +  +
 
709
         ..N..L..S..N..Y..F..W..I..R..V..V..E..M..F..R
 
710
3774889 CATTTAAAGAATTATAAAACCATATCCTTACGACTTCCATAAACCGTTGTTTATTGTTTAAAACTTGATCAG
 
711
 
 
712
                                                                      [-2c]
 
713
                                                                      2.6e-07
 
714
                                                                      ..Q..R..R.
 
715
        
 
716
                                                                      ..N..L..S.
 
717
3854521 GGGAGAAGATGGGACACATTTTCATTCCATTTTCTTTGTACGTTTTGTTGTAAACAAAAGACATTCAAAGAA
 
718
 
 
719
        
 
720
        
 
721
        .N..C..F..W..V..R..V..V..E..K..E..L
 
722
         +     +        +  +  +  +  +
 
723
        .N..Y..F..Q..I..R..V..V..E..R..S..R
 
724
3854593 TTATAAAACTGTATCCTCACGACTTCCCTAGACCGTTGTTAATTGTTTAGAAACCAATCAGGAAGTTTAAAT
 
725
 
 
726
                                                           [-1a]
 
727
                                                           4.3e-07
 
728
                                                           ..F..S..L..Q..L..A..E
 
729
                                                                +  +     +     +
 
730
                                                           ..S..S..I..K..L..D..E
 
731
3895921 TACGGTATGGCTGACAACTTAAACAATCCATATGGAAGGCTACTGTGTTGGAGAACTTATTTTTAAGTCTTC
 
732
 
 
733
        
 
734
        
 
735
        ..F..R..C..I..T..T..Q..S
 
736
          +  +     +           +
 
737
        ..F..R..T..I..C..I..*..S
 
738
3895993 AAATCTTGTAATGCAGATCTACGACACCGAACTTGAGAATGCGAACGAGTTTTCAGGTTTTAACGACCTTTT
 
739
 
 
740
           [-1a]
 
741
           6.4e-08
 
742
           ..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
743
                +  +  +  +  +     +  +  +     +
 
744
           ..V..S..L..N..L..N..G..F..R..C..V..T..N..*..*
 
745
3930625 ACGAACCGATAAGTTCAAGTTTCCGAAACGACAAACGGTATTTTATCAACAATAGATAAACGACTAAAAACA
 
746
 
 
747
           [-2a]
 
748
           8.4e-07
 
749
           ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
750
                      +  +  +              +     +  +  +
 
751
           ..I..L..A..N..C..F..N..G..S..Y..V..Q..K..E..L
 
752
3963313 ACTGATTAATGCATTGCAGAAATTTCCAGAGTATACCTGTTTCTCTAAAATGAGGACTTGTGATTGTCATAA
 
753
 
 
754
                                                                         [+1c]
 
755
                                                                         1.2e-08
 
756
                                                                         S..Q..T
 
757
                                                                         +     +
 
758
                                                                         S..H..S
 
759
4033225 AAACCCAAAAAGAAATGCACTTGTAGTACTGTGGGGTAAGATGGATGTCGATATAGCACATTTTATCCCATT
 
760
 
 
761
        
 
762
        
 
763
        ..T..I..C..R..F..E..A..L..Q..L..S..F..
 
764
                +  +  +     +     +  +  +  +
 
765
        ..S..*..S..R..F..N..N..*..Q..L..S..F..
 
766
4033297 CTTCATAATCGCGTTTTAACAATTAACAACTCTCTTTTACAATCGTGAGGTAACGGTTATATAATTCTGTAA
 
767
 
 
768
            [+1b]
 
769
            1.2e-08
 
770
            S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
771
            +     +        +  +  +     +     +  +  +  +
 
772
            S..H..S..S..*..S..R..F..N..N..*..Q..L..S..F..
 
773
4054105 TTTATCCCATTCTTCATAATCGCGTTTTAACAATTAACAACTCTCTTTTACAATCGTGAGGTAACGGTTATA
 
774
 
 
775
                                  [+2c]
 
776
                                  8.4e-07
 
777
                                  L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
778
                                  +     +        +        +  +     +
 
779
                                  L..Y..R..S..L..V..K..I..W..F..Y..N..S..L..V..
 
780
4116241 TTATGTTTTAAACAATTAACAACGGTCTATATAGGAGTCTCGTGAAAATATGGTTTTATAATTCTTTGGTTG
 
781
 
 
782
            [-4b]
 
783
            1.7e-07
 
784
            ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
785
                 +        +  +  +     +  +  +  +  +     +
 
786
            ..L..L..G..L..S..L..V..L..K..L..K..I..A..T..K
 
787
4139497 TGGACAATAATCCCAGACTGAGGACTAACTTCAATTTGATTGCGGTTTTCATCTTTCTAATAAGAACAAAGA
 
788
 
 
789
                                                                    [-4a]
 
790
                                                                    9.3e-07
 
791
                                                                    ..E..L..W..K
 
792
                                                                      +     +  +
 
793
                                                                    ..E..R..W..A
 
794
4148785 TTTGGTTATTAGGAGAATGAAGGTATAATAAAAATAGTATTCAAAACTAAAAAAATGATATTCACGCCATGC
 
795
 
 
796
        
 
797
        
 
798
        ..Q..L..L..P..K..L..K..C..M..N..K
 
799
             +     +        +        +  +
 
800
        ..*..L..*..A..Q..*..K..N..I..N..K
 
801
4148857 TTATAACTATGCTTGTCATTTATTGATGTTTTTTATTTGTATTAGGTAAATGAACAAAATCCTCAAGTGTTT
 
802
 
 
803
         [+1b]
 
804
         8.0e-07
 
805
         S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
806
         +           +  +     +        +  +  +  +  +
 
807
         S..*..P..G..I..S..T..F..Q..*..L..D..I..S..H..
 
808
4188385 ATCCTGACCTGGAATCTCAACTTTTCAATAACTTGACATCAGCCATACAATTACTACAAGGTAAGATAATGT
 
809
 
 
810
                                                           [-2a]
 
811
                                                           8.0e-08
 
812
                                                           ..Q..R..R..N..C..F..W
 
813
                                                                      +  +  +  +
 
814
                                                           ..H..L..F..N..C..F..W
 
815
4231657 GGACATCATTTCATTTTATTTACTCGTCTCACTTGGTAGTAAAAAAAGAAAATGCAAAAAATTACAAAACCA
 
816
 
 
817
        
 
818
        
 
819
        ..V..R..V..V..E..K..E..L
 
820
             +  +  +
 
821
        ..I..R..V..V..G..T..S..R
 
822
4231729 TATCCTCACAACTCCCGTAGACCGTTGTTAATTGTTCAAATCACAATCAAGATGTTTGGAGATTATGAGCTA
 
823
 
 
824
          [+4c]
 
825
          3.3e-07
 
826
          K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
827
          +           +     +  +  +  +  +  +     +
 
828
          N..L..L..K..K..I..K..P..I..L..Q..K..F..V..H..
 
829
4348441 AAAACCTTCTTAAAAAGATCAAACCAATCTTGCAGAAGTTTGTCCACGATGACACCAACTTACAACTACATG
 
830
 
 
831
                                                                            [+4c
 
832
                                                                            9.3e
 
833
                                                                            K..N
 
834
                                                                            +  +
 
835
                                                                            N..S
 
836
4355281 TAAATTTTGAACGTATATATACTGTGTTTTGTAAATTTTGAACATATTCAGTTTTTAAACATCTACAAAATT
 
837
 
 
838
        ]
 
839
        -07
 
840
        ..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
841
                +     +  +  +  +     +
 
842
        ..Q..N..A..I..K..P..I..L..I..K..Y..*..L..
 
843
4355353 CCCAAAATGCAATTAAACCCATACTTATAAAATATTAATTACAAGTCGCATTAATTAATTTGGCAAATACAC
 
844
 
 
845
                                              [+2c]
 
846
                                              1.9e-07
 
847
                                              L..E..K..E..V..V..R..V..W..F..C..N
 
848
                                                          +  +  +  +  +  +     +
 
849
                                              R..S..M..G..V..V..R..V..W..F..Y..N
 
850
4426489 AATCCAAATATTCTGATCATGTTTTAAACAATTCACAACGGTCTATGGGAGTTGTAAGGGTATGGTTTTATA
 
851
 
 
852
        
 
853
        
 
854
        ..R..R..Q..
 
855
        
 
856
        ..T..L..N..
 
857
4426561 ATACTTTGAATGTTCTTTGTTTACTACCAAATGGGACAAAAATAATTAAAGGGTGTCCCATCTTTCCCTACC
 
858
 
 
859
           [-2a]
 
860
           4.6e-07
 
861
           ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
862
                +           +           +  +     +  +  +
 
863
           ..M..R..*..V..Y..F..F..I..S..V..V..S..R..K..L
 
864
4569769 TCCCATTCGCTAAACATAAAAGAAAATTGAAACTACGCTGCGTTTTAATAGTGTATATACGGCCATAGATAC
 
865
 
 
866
                  [+1b]
 
867
                  7.1e-07
 
868
                  S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
869
                  +     +        +     +  +        +  +  +
 
870
                  S..L..T..S..L..S..P..F..E..L..G..T..I..S..L..
 
871
4952521 TAGCGATCAAAGTTTGACGAGCCTCTCTCCTTTTGAACTTGGCACAATTTCTCTTACTTGTTGGTTTAATAT
 
872
 
 
873
                        [+3b]
 
874
                        7.8e-07
 
875
                        F..K..Q..R..R..I..K..L..G..F..T..Q..A..D..V..
 
876
                              +  +        +  +        +  +  +  +  +
 
877
                        E..R..I..R..N..C..K..L..S..K..T..Q..G..N..V..
 
878
4967569 GGAAATTGTGGTTTCTGAAAGGATAAGAAACTGCAAATTATCTAAAACTCAGGGAAACGTTTAAAATCATGT
 
879
 
 
880
                [-3c]
 
881
                3.8e-07
 
882
                ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
883
                  +     +     +  +  +        +     +        +
 
884
                ..V..S..A..T..T..V..G..I..I..I..N..R..R..R..F
 
885
5135617 CAGATGGTTACAGAAGCAGTGGTAACACCAATGATAATGTTGCGCCTTCTAAACAGAGCAAAGAATCTTGTA
 
886
 
 
887
                                                          [+3c]
 
888
                                                          7.8e-07
 
889
                                                          F..K..Q..R..R..I..K..L
 
890
                                                          +     +     +     +  +
 
891
                                                          F..I..Q..C..R..E..S..L
 
892
5147065 ACTTAATTGCCCCCCAAAAAATAATTAATTACATTTTCCGAAATGGTTGCTTTATACAGTGTAGAGAAAGTC
 
893
 
 
894
        
 
895
        
 
896
        ..G..F..T..Q..A..D..V..
 
897
          +           +     +
 
898
        ..G..L..S..L..A..Y..V..
 
899
5147137 TTGGCCTAAGTTTAGCTTATGTGTCACAATTTGACATTACAATTATCATTATAATACAATTTAAATAGTTTG
 
900
 
 
901
                                        [-2c]
 
902
                                        5.7e-07
 
903
                                        ..Q..R..R..N..C..F..W..V..R..V..V..E..K.
 
904
                                             +     +     +     +     +        +
 
905
                                        ..F..R..I..N..Y..F..F..V..Q..V..C..Q..K.
 
906
5233033 ATTATATGATGCAAAAATTATATGATGCTTAAAAACCTAATGTTGTAGAAAAATACCTGAACACATTGTTTT
 
907
 
 
908
        
 
909
        
 
910
        .E..L
 
911
            +
 
912
        .R..Y
 
913
5233105 CTATAGAGTTTGTGAGTTCAGTAAGACTGAGTGCTTTTGCGCATGATTTGACTACAAATTTCACGGCTTCAA
 
914
 
 
915
                        [+2b]
 
916
                        4.0e-07
 
917
                        L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
918
                        +     +  +  +  +  +        +     +
 
919
                        L..F..K..E..V..V..R..P..L..F..D..N..L..I..I..
 
920
5349097 GGAACCTGTAAGACCTTTGTTTAAGGAAGTTGTAAGACCTTTGTTTGATAACTTAATAATAGTTGTCACATG
 
921
 
 
922
                             [-3a]
 
923
                             4.7e-07
 
924
                             ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
925
                                  +  +  +     +     +  +  +  +  +     +
 
926
                             ..R..N..T..Q..W..F..S..L..S..I..R..R..L..K..G
 
927
5412025 TATGCTTTGCTAAATCAACTGTCTGTTTGTTTGCCAAAACGACAAACTAATGCGGCGCAATTTACCCTGCGA
 
928
 
 
929
                             [+2a]
 
930
                             2.6e-07
 
931
                             L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
932
                             +     +  +  +        +           +  +     +
 
933
                             L..Q..R..N..V..C..S..V..S..R..*..N..R..T..Q..
 
934
5476969 TTTATATCAACTTGTATTTTTTTACAAAGAAATGTGTGTTCTGTAAGTCGTTAAAACCGAACACAAAACGTG
 
935
 
 
936
                                               [+2a]
 
937
                                               6.8e-07
 
938
                                               L..E..K..E..V..V..R..V..W..F..C..
 
939
                                                        +  +  +  +        +  +
 
940
                                               Q..S..M..E..V..V..R..I..Q..F..C..
 
941
5526001 GACACTATCTTGATCGTTGTTTTTAAAAACAATTAGCATCAGTCTATGGAAGTTGTAAGGATACAGTTTTGC
 
942
 
 
943
        
 
944
        
 
945
        N..R..R..Q..
 
946
        +
 
947
        N..S..L..N..
 
948
5526073 AATTCTTTGAATGTCTTTGTTTACCACCAAATACGACGAGAAAATAGAATGAAAAGGTGTCCTATCTTTCCC
 
949
 
 
950
                    [+3a]
 
951
                    8.2e-07
 
952
                    F..K..Q..R..R..I..K..L..G..F..T..Q..A..D..V..
 
953
                    +  +        +     +     +  +  +     +     +
 
954
                    L..K..E..S..R..N..K..R..G..V..T..F..T..T..V..
 
955
5582809 AGGAAGTACTCGCTAAAAGAGTCGCGAAATAAACGTGGTGTCACATTTACTACCGTTGCGCGGGTGGTAAAG
 
956
 
 
957
                                            [+2a]
 
958
                                            4.1e-08
 
959
                                            L..E..K..E..V..V..R..V..W..F..C..N..
 
960
                                            +           +  +  +     +  +     +
 
961
                                            L..S..M..G..V..V..R..I..W..F..Y..N..
 
962
5597713 TACAAATATCCTGATCTTGTTTTAAACAGTTAACAACTGTCTATGGGAGTCGTGAGGATATGGTTTTATAAT
 
963
 
 
964
        
 
965
        
 
966
        R..R..Q..
 
967
        
 
968
        S..L..N..
 
969
5597785 TCTTTAAATGTTCTTTATTTACTACCAAGTGGGACAAGAAAATAGAACTAAAAGGTGTCCCATCTTCTCGCA
 
970
 
 
971
                    [-2a]
 
972
                    6.5e-07
 
973
                    ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
974
                               +  +  +     +     +     +  +
 
975
                    ..Y..K..K..N..C..F..S..V..S..V..K..D..K..T..S
 
976
5603905 AGTATAATTTCTATACTTTTTATTGCAGAAAGAAACAGAAACTTTATCTTTTGTTGAAAAACTTCTGACACA
 
977
 
 
978
                          [-2a]
 
979
                          8.8e-07
 
980
                          ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
981
                                     +     +  +     +  +  +
 
982
                          ..I..L..S..N..Y..F..W..I..R..V..V..G..I..S..R
 
983
5628673 TTTTAGTAAACAAAGAACAATCAAAGAATTATAAAACCATATCCTCACGACTCCTATAGACCTTTGTTGATT
 
984
 
 
985
                                  [-2c]
 
986
                                  7.7e-07
 
987
                                  ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
988
                                          +        +  +     +  +        +  +
 
989
                                  ..P..Y..R..T..A..F..W..L..R..V..K..G..K..E..R
 
990
5704201 GTTCCAGTCTATTATGGTGTGGTGTATGGATAGCGAGTAGCGAACCAGAGTCTCACTTTCCCTTTTTCTCGC
 
991
 
 
992
                                                        [+2a]
 
993
                                                        2.1e-07
 
994
                                                        L..E..K..E..V..V..R..V..
 
995
                                                        +        +  +     +
 
996
                                                        Y..Q..V..N..V..K..R..I..
 
997
5737249 CGACAAGAGAATGTTCGGAACTTGTGGTTGAGGCCACTTACAAGACGATACCAAGTTAATGTGAAACGAATT
 
998
 
 
999
        
 
1000
        
 
1001
        W..F..C..N..R..R..Q..
 
1002
           +     +  +     +
 
1003
        R..F..R..N..R..A..Q..
 
1004
5737321 CGTTTTCGAAACCGAGCACAGAACTTTACTAATGACCAAACACAGGTTAATACAGTTTAAATATTTCGTTTT
 
1005
 
 
1006
                                                              [+2a]
 
1007
                                                              4.4e-07
 
1008
                                                              L..E..K..E..V..V..
 
1009
                                                                       +  +  +
 
1010
                                                              R..F..V..E..V..V..
 
1011
5961241 NNCCTTTAACAGATAGTTTTCAAATAGCCTGATCGTGTTTTAAAGAATTAACAACGGTTTGTGGAAGTCGTA
 
1012
 
 
1013
        
 
1014
        
 
1015
        R..V..W..F..C..N..R..R..Q..
 
1016
        +     +  +     +
 
1017
        R..I..W..F..H..N..S..L..D..
 
1018
5961313 AGGATATGGTTTCATAATTCTTTGGATGTTCTTTGTTTACTACCAAATGGAAAGAGAAAACTAAATGAAAAG
 
1019
 
 
1020
                                           [+2c]
 
1021
                                           1.9e-07
 
1022
                                           L..E..K..E..V..V..R..V..W..F..C..N..R
 
1023
                                                    +  +  +  +     +  +     +
 
1024
                                           R..S..V..E..V..V..R..I..W..F..H..N..S
 
1025
5964841 CCAAATAGCCTGATCGTGTTTTAAAGAATTAACAACGGTCTGTGGAAGTCGTAAGGATATGGTTTCATAACT
 
1026
 
 
1027
        
 
1028
        
 
1029
        ..R..Q..
 
1030
        
 
1031
        ..L..D..
 
1032
5964913 CTTTGGATGTTCTTTGTTTACTTCCAAATGGAAAGAGAAAACAAAATGAAAAGGTGTCCCATCTTCCCCCAT
 
1033
 
 
1034
                                                                          [+1a]
 
1035
                                                                          1.5e-0
 
1036
                                                                          S..Q..
 
1037
        
 
1038
                                                                          H..L..
 
1039
6022513 ATCCAAAATAACACTTTTGCAAATTGAAAGAACTTTTTTTTTCAAATTTAAACATTTTTAAAATTGCACCTT
 
1040
 
 
1041
        
 
1042
        7
 
1043
        T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1044
              +  +     +     +  +  +  +  +  +
 
1045
        F..*..I..C..T..F..L..S..L..N..L..S..F..
 
1046
6022585 TTTTAAATTTGCACCTTTTTAAGTTTAAACCTGTCTTTTAATGCTGGCTATTTTTAGTCACCACTGTGGCCT
 
1047
 
 
1048
         [-2b]
 
1049
         7.1e-07
 
1050
         ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1051
                    +     +  +     +  +  +
 
1052
         ..N..L..S..N..Y..F..W..I..R..V..V..G..L..S..Q
 
1053
6343633 CATTCAAAGAATTATAAAACCATATCCTTACGACTCCCAAAGACTGTTGTTAATTGTTTAAAACATGATCAG
 
1054
 
 
1055
                        [+4b]
 
1056
                        1.9e-07
 
1057
                        K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1058
                        +  +  +  +  +                 +  +  +  +  +
 
1059
                        N..N..A..C..K..Y..S..L..F..T..N..K..W..V..E..
 
1060
6443137 TCGTGTTTCAACAATTAACAACGCTTGTAAATATTCTTTGTTTACTAATAAATGGGTCGAATAAAAAATTGG
 
1061
 
 
1062
                     [+4b]
 
1063
                     5.9e-07
 
1064
                     K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1065
                     +  +  +  +  +           +  +  +        +  +
 
1066
                     N..S..A..V..K..I..V..K..I..L..N..M..K..L..E..
 
1067
6457753 CTCGCGACTCTGAAATAGCGCTGTTAAAATTGTTAAAATCTTGAATATGAAACTCGAGTATTATCTGTAACC
 
1068
 
 
1069
                                                                      [-2c]
 
1070
                                                                      4.6e-07
 
1071
                                                                      ..Q..R..R.
 
1072
        
 
1073
                                                                      ..C..L..V.
 
1074
6472009 GAGTGGGTTAAAGATGCGACGAAGTCACATTCATTCTATTTTCTTGTCCAATTTGGTAGTAAACAAAGAACA
 
1075
 
 
1076
        
 
1077
        
 
1078
        .N..C..F..W..V..R..V..V..E..K..E..L
 
1079
         +     +     +  +  +  +     +
 
1080
        .N..F..F..Q..V..R..V..V..G..K..S..W
 
1081
6472081 TTAAAAAACTGTACCCTCACGACTCCCTTAGACCATTGTTAATTGTTTAAACACAATCAGGATATTTTGGAT
 
1082
 
 
1083
                                                         [-4b]
 
1084
                                                         3.8e-07
 
1085
                                                         ..E..L..W..K..Q..L..L..
 
1086
                                                              +     +     +  +
 
1087
                                                         ..K..L..E..R..H..L..L..
 
1088
6623713 GGAGCAGAATAATGCTTTGATTGTGAAAGAAATGACTTTCCAGGTCGCTTTTTAGTTCTCGGTGTAAAAGGT
 
1089
 
 
1090
        
 
1091
        
 
1092
        P..K..L..K..C..M..N..K
 
1093
           +  +  +  +        +
 
1094
        N..R..L..K..I..S..D..K
 
1095
6623785 TTCTCAGTTTTATTGAATCTTTCTTCATGTCTTTCCAGATAATCCCCGTTATAAGTTACATCCATAACTTGT
 
1096
 
 
1097
                    [-2a]
 
1098
                    2.2e-08
 
1099
                    ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1100
                               +     +  +     +  +  +     +
 
1101
                    ..L..*..S..N..Y..F..W..I..R..V..V..K..K..S..R
 
1102
6715585 TTAGTAAACGAAAAGCTAAGAATTATAAAACCATATCCTCACGACTTTCTTAGACCGTTTAATAATTGTTTA
 
1103
 
 
1104
 
 
1105
chr02q
 
1106
  
 
1107
  LENGTH = 8059593  COMBINED P-VALUE = 2.06e-23  E-VALUE =  9.1e-20
 
1108
  DIAGRAM: 181586_[+1c]_84138_[-3c]_15167_[-2b]_135571_[-4c]_325471_[+4a]_
 
1109
           12798_[-4a]_4700_[-2c]_182142_[-1c]_7912_[-1a]_80644_[-2b]_143591_
 
1110
           [-2a]_5286_[-1a]_17554_[-4b]_104512_[+2c]_75992_[-2b]_1994_[+2a]_
 
1111
           7759_[-2b]_11678_[+4a]_544_[+2b]_15348_[+2b]_53558_[+2a]_756_[-2a]_
 
1112
           132170_[-3c]_6820_[+1a]_226852_[+2b]_107962_[+1c]_5949_[-2c]_138458_
 
1113
           [-4b]_133762_[+1c]_126753_[-2c]_69234_[+1c]_33_[+1c]_72_[+1c]_150_
 
1114
           [+1c]_33_[+1c]_72_[+1c]_267_[+1c]_33_[+1c]_15489_[-1c]_21704_[+1b]_
 
1115
           72_[+1b]_346_[+1c]_96059_[-4b]_36498_[-2b]_335_[-4a]_[-1a]_155_
 
1116
           [-3c]_18189_[-1c]_174870_[-2c]_38785_[+1a]_40123_[+2b]_147684_[-1b]_
 
1117
           122397_[+2b]_45479_[+4a]_74846_[+1c]_23231_[+3b]_38245_[-4c]_152196_
 
1118
           [-2c]_304660_[+2a]_165655_[-4b]_38440_[-4c]_21816_[+1c]_25500_[-2c]_
 
1119
           336004_[+3a]_323232_[-4a]_7268_[+2c]_47044_[+4a]_41451_[-2a]_66303_
 
1120
           [+2a]_30342_[+1a]_40657_[-4b]_180301_[-2c]_35205_[-2c]_59610_[-2c]_
 
1121
           2222_[+1b]_1400_[-2a]_53171_[-2c]_175866_[-2c]_162426_[-2c]_70915_
 
1122
           [+2a]_33010_[-1b]_139023_[+1b]_248403_[-2b]_102258_[+2b]_13294_
 
1123
           [-4c]_85097_[+2b]_13395_[-4b]_217923_[-2b]_252830_[-2a]_40346_[-3c]_
 
1124
           9779_[+1b]_15798_[-1b]_16835_[+1a]_31854_[-2a]_3867_[+2a]_28000_
 
1125
           [+1b]_14934_[+2b]_18632_[+4a]_54520_[+2b]_53902_[+1c]_198948_[-2c]_
 
1126
           10079_[+1b]_162971_[-2a]_106411_[+2b]_74994_[-4b]_11202_[-4b]_165552_
 
1127
           [+2b]_7010_[-2a]_12481_[-2b]_23349_[+1b]_102412_[+2c]_100606_[-4a]_
 
1128
           31326
 
1129
 
 
1130
 
 
1131
          [+1c]
 
1132
          5.5e-07
 
1133
          S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1134
          +              +  +     +  +  +     +  +  +
 
1135
          S..S..P..S..L..S..R..N..E..S..L..R..I..T..F..
 
1136
181585  CATCAAGTCCGTCATTATCGAGAAACGAATCGTTGAGAATTACCTTCTTCTCTTCTTCTCTCAAGCGAGTTT
 
1137
 
 
1138
                         [-3c]
 
1139
                         1.9e-07
 
1140
                         ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
1141
                           +        +  +  +  +  +     +           +  +
 
1142
                         ..V..L..S..Q..T..V..G..L..L..I..N..V..F..K..L
 
1143
265753  AGCCAAATAAAACACAGGACCAAACTCTGGGTAACACCTAAAAGTATGTTAACAAACTTCAAGGGGAAATTG
 
1144
 
 
1145
                                             [-2b]
 
1146
                                             8.4e-07
 
1147
                                             ..Q..R..R..N..C..F..W..V..R..V..V..
 
1148
                                                        +     +  +        +
 
1149
                                             ..Y..*..N..N..Y..F..W..Q..*..I..F..
 
1150
280945  AAAAAAACATGACATATACAGTGTGTTAAGGCTGGTAATACTAGTTGTTGTAAAACCATTGCTAAATAAACT
 
1151
 
 
1152
        
 
1153
        
 
1154
        E..K..E..L
 
1155
        +  +     +
 
1156
        E..K..M..L
 
1157
281017  CTTTCATTAAAACTAGAACTAAAATAATGTGACAGAAAATATACTTACTGCATTGATAATATATGATGAATA
 
1158
 
 
1159
             [-4c]
 
1160
             2.3e-07
 
1161
             ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
1162
               +  +  +     +  +  +  +  +              +  +
 
1163
             ..N..L..W..S..Q..L..V..P..K..G..I..A..E..S..N
 
1164
416593  ATGGAATTTAGCCAAGATTGCAGAACAGGTTTGCCTATTGCTTCAGAATTATGATTGTTACGCCTAGATGAA
 
1165
 
 
1166
                 [+4a]
 
1167
                 8.5e-07
 
1168
                 K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1169
                 +  +        +  +        +  +        +  +
 
1170
                 N..S..F..Y..K..L..V..*..L..L..I..S..W..L..*..
 
1171
742105  TGGCAAAGTAACAGTTTTTATAAATTAGTTTAGCTTCTTATATCTTGGCTATAAACTTAAAAATTCATTATA
 
1172
 
 
1173
                                            [-4a]
 
1174
                                            5.3e-07
 
1175
                                            ..E..L..W..K..Q..L..L..P..K..L..K..C
 
1176
                                                       +     +     +  +     +  +
 
1177
                                            ..I..G..Q..K..F..L..*..P..K..I..K..V
 
1178
754921  TTCACTGTGAGTTAACCAAAAACTCCAGACATGCAGTATACCTTGTTTAAATAGTTACGGCTTTATTTTGAC
 
1179
 
 
1180
        
 
1181
        
 
1182
        ..M..N..K
 
1183
          +  +  +
 
1184
        ..A..N..N
 
1185
754993  AGCATTGTTTTATCGTTAAACCCATATGTTTGCCAACAAATTACTTTTATTTGTTTAACTTTTTGCACTTTT
 
1186
 
 
1187
                                     [-2c]
 
1188
                                     4.8e-07
 
1189
                                     ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E.
 
1190
                                       +        +     +           +  +  +  +
 
1191
                                     ..Q..W..V..N..G..F..D..F..Y..I..V..N..K..Q.
 
1192
759673  TGGGGGAAGATGGGACACTTAAACATATATTGCCAAACATTTCCAAAATCAAAATAGATGACGTTTTTTTGG
 
1193
 
 
1194
        
 
1195
        
 
1196
        .L
 
1197
         +
 
1198
        .Y
 
1199
759745  TAATACCACGAAGTAGTACTACTATTCCTTTATTAATTGACAACGATTTAATAATATAAATATAATAAAACA
 
1200
 
 
1201
                                                                [-1c]
 
1202
                                                                6.2e-07
 
1203
                                                                ..F..S..L..Q..L.
 
1204
                                                                     +  +
 
1205
                                                                ..L..S..L..S..Y.
 
1206
941833  TATGTTTAATATTCAAAATTGATTAGCAACAAGTTAGGGTATCTGTTTGCGATTTTGAGGCTTAAAGAATAT
 
1207
 
 
1208
        
 
1209
        
 
1210
        .A..E..F..R..C..I..T..T..Q..S
 
1211
            +  +  +     +
 
1212
        .K..E..F..R..N..I..S..K..H..T
 
1213
941905  TTTTCAAATCTATTTATTGATTTGTGTGTTTGAGGGAAATATTAGTTCTCTGTTTTGAATTAAAATATATTA
 
1214
 
 
1215
                             [-1a]
 
1216
                             6.2e-07
 
1217
                             ..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
1218
                                  +  +           +  +  +     +
 
1219
                             ..L..S..L..S..Y..K..E..F..R..N..I..S..K..H..T
 
1220
949825  AGGGTATCCATTTGCGATTTTGAGGCTTAAAGAATATTTTTCAAATCTATTTATTGATTTGTGTGTTTGAGG
 
1221
 
 
1222
                                                                              [-
 
1223
                                                                              8.
 
1224
                                                                              ..
 
1225
        
 
1226
                                                                              ..
 
1227
1030465 GTATTGCATTGGTGCGATGTATAGTAGAGTGGGGGAATTTTCTCGACTCATTTGATAGTAAATATAAAACAT
 
1228
 
 
1229
        2b]
 
1230
        0e-08
 
1231
        Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1232
                 +     +  +     +  +  +  +
 
1233
        N..L..S..N..Y..F..W..I..R..V..V..E..M..S..R
 
1234
1030537 TCAAAGAATTATAAAACCATATCCTCACGACTTCCATAGACCGTTGGTAAATATTTAAAACACGATCAGAGT
 
1235
 
 
1236
                                                                          [-2a]
 
1237
                                                                          5.5e-0
 
1238
                                                                          ..Q..R
 
1239
        
 
1240
                                                                          ..V..*
 
1241
1174105 TTGGTGGGGGAAGATGGGACACCTTTTTATTCTATTTTCTTGTGTCATTCGGTAGTAAACAAAGAACACTCA
 
1242
 
 
1243
        
 
1244
        7
 
1245
        ..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1246
             +     +     +  +  +  +           +
 
1247
        ..F..N..Y..F..R..V..R..V..V..G..A..T..L
 
1248
1174177 AAAATTATAAAACCGTACCCTCACGACTCCCGCCGTTAGTAGTTGTTAAAAACAAGATCAAGATGTTTGGAC
 
1249
 
 
1250
                                                                             [-1
 
1251
                                                                             2.4
 
1252
                                                                             ..F
 
1253
                                                                               +
 
1254
                                                                             ..F
 
1255
1179433 TATCAATTTATTATACAATCATATACTGTGGGTAACATGTTAAAAACCATAGCAGTAGGGCAGGACAAAAAA
 
1256
 
 
1257
        a]
 
1258
        e-08
 
1259
        ..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
1260
          +  +     +  +  +  +  +     +        +
 
1261
        ..T..L..I..L..N..E..F..R..K..I..N..N..Q..*
 
1262
1179505 TGTTAAAATTAGATTTTCAAACCGTTTAATATTATTTTGTTAAGTTTACGTGTATTTCTAATAATAAATTCA
 
1263
 
 
1264
                                    [-4b]
 
1265
                                    4.4e-07
 
1266
                                    ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..
 
1267
                                      +        +     +  +        +     +  +  +
 
1268
                                    ..N..K..V..K..K..L..V..S..F..L..Y..C..M..N..
 
1269
1197073 TGTCGCAAATCAACCGCTTCTAATTCTAATTTTTGACTTTTTTTAACACAGAAAACAAATAACACATGTTTT
 
1270
 
 
1271
        
 
1272
        
 
1273
        K
 
1274
        +
 
1275
        K
 
1276
1197145 TTACATTTTTCAACCTTTAAATTTGTTTTTAGGCCCAAGTTTTTCTGTAATTTACCGAAAAACATACATTTT
 
1277
 
 
1278
                                                 [+2c]
 
1279
                                                 1.4e-07
 
1280
                                                 L..E..K..E..V..V..R..V..W..F..C
 
1281
                                                             +  +  +  +  +  +
 
1282
                                                 R..S..M..*..V..V..R..V..W..F..Y
 
1283
1301617 TAATATCCAAATATCCTGATCGTGTTTTATACAGCCACCAACGGTCTATGTGAGTCGTGAGGGTGTGGTTTT
 
1284
 
 
1285
        
 
1286
        
 
1287
        ..N..R..R..Q..
 
1288
          +
 
1289
        ..N..S..S..N..
 
1290
1301689 ATAATTCCTCGAATGCTCTTTGTTTACTACCAAATTGGACGAGAAAATAGAATGAAAAGATGTCCCATCTTC
 
1291
 
 
1292
                                                      [-2b]
 
1293
                                                      6.2e-07
 
1294
                                                      ..Q..R..R..N..C..F..W..V..
 
1295
                                                        +        +     +
 
1296
                                                      ..Q..L..I..N..*..F..R..L..
 
1297
1377649 ATTATTCTATCGTTGAGTGGAGTTAGAGGGGACATTTATGCACATATTGAAGAATATTTTAAAATCTTAAAT
 
1298
 
 
1299
        
 
1300
        
 
1301
        R..V..V..E..K..E..L
 
1302
           +  +     +  +  +
 
1303
        D..I..V..S..R..E..L
 
1304
1377721 CTATAACGCTTCGTTCGAGCATCTCTAGCTACAAAATATTTTGAATTCCTGTTAACTTTTAATGCTAAATAT
 
1305
 
 
1306
                                                                             [+2
 
1307
                                                                             2.5
 
1308
                                                                             L..
 
1309
        
 
1310
                                                                             Q..
 
1311
1379665 TTTCGTACTGTAGGACACCTTTAGCACATAATATCGAAATATTCTGATCGTATTTTAAACAATTAACAGCAG
 
1312
 
 
1313
        a]
 
1314
        e-07
 
1315
        E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1316
                 +  +  +  +  +  +     +
 
1317
        S..M..A..V..V..R..V..W..F..Y..N..F..L..N..
 
1318
1379737 TCTATGGCAGTCGTCAGGGTGTGGTTTTATAATTTTTTGAATGTTCTTTGTTTACTAATAAATAGGACGAGA
 
1319
 
 
1320
                                 [-2b]
 
1321
                                 1.8e-07
 
1322
                                 ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1323
                                            +     +        +  +  +  +  +
 
1324
                                 ..H..L..S..N..Y..F..R..I..R..V..V..E..R..P..R
 
1325
1387513 CCCAATTTGGTAGTAAACAAATAAAATGCAAAGAATTATAAAAGCGTATCCTAACGACTTCCCTAGGCCGTT
 
1326
 
 
1327
                    [+4a]
 
1328
                    4.6e-07
 
1329
                    K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1330
                    +  +  +  +        +  +  +  +
 
1331
                    N..N..A..C..C..I..K..A..I..L..G..T..F..M..I..
 
1332
1399249 CGGGTAAACAATAATAACGCGTGCTGTATCAAAGCTATTCTTGGAACATTCATGATCCATCTATTTCTAAGT
 
1333
 
 
1334
                                 [+2b]
 
1335
                                 8.8e-07
 
1336
                                 L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1337
                                 +  +  +  +     +           +           +
 
1338
                                 L..E..K..N..L..V..F..I..S..F..K..*..N..R..*..
 
1339
1399825 CTGGTAAGCATATGCAAGATTCCTCTTGGAAAAAAATCTTGTGTTTATCTCATTTAAGTGAAACCGATAATG
 
1340
 
 
1341
                  [+2b]
 
1342
                  4.3e-08
 
1343
                  L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1344
                           +  +  +  +     +  +     +
 
1345
                  V..S..M..E..V..V..R..I..W..F..Y..N..S..S..N..
 
1346
1415233 AAATTAACAAGTGTCTATGGAAGTCGTGAGAATATGGTTTTATAATTCTTCGAATTTTCTTTGTTTACTACT
 
1347
 
 
1348
                                                     [+2a]
 
1349
                                                     2.4e-07
 
1350
                                                     L..E..K..E..V..V..R..V..W..
 
1351
                                                     +        +  +  +  +
 
1352
                                                     L..S..M..E..V..V..R..I..L..
 
1353
1468801 GCACATAATTTCCAAATATCCTGATCGTCTTTTAAACAATTAAAACTGTCTATGGAAGTCGTAAGGATACTG
 
1354
 
 
1355
        
 
1356
        
 
1357
        F..C..N..R..R..Q..
 
1358
        +     +
 
1359
        F..Y..N..S..L..N..
 
1360
1468873 TTTTATAATTCCTTGAATGTTCTTTGTTTACTACCAAATGCAATGAAAAAGTAGAATAAAAGGGTGTCCCAT
 
1361
 
 
1362
                                                              [-2a]
 
1363
                                                              5.7e-07
 
1364
                                                              ..Q..R..R..N..C..F
 
1365
                                                                         +     +
 
1366
                                                              ..V..S..N..N..T..F
 
1367
1469593 ACTTTGCATCATGTTGAGGCTCTGGTGCTTGGAAATTAACCTCTTCCACTAACAAACGCTGTTGTTCGTAAA
 
1368
 
 
1369
        
 
1370
        
 
1371
        ..W..V..R..V..V..E..K..E..L
 
1372
             +        +  +  +     +
 
1373
        ..S..V..I..*..V..E..K..S..L
 
1374
1469665 ACTAACAATTCACACTTCTTTGCTTAAGCATGGGCAGGAAATGTCAGAATGTCATTTTGAGATCGCTCTCAC
 
1375
 
 
1376
             [-3c]
 
1377
             9.0e-07
 
1378
             ..V..D..A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
1379
                     +     +     +  +  +  +  +  +     +  +
 
1380
             ..C..K..A..T..T..A..G..L..K..I..R..K..N..K..L
 
1381
1601857 GTAAAACATTTCGCCGTAGTGGCACCGAGTTTAATGCGCTTGTTTTTTAACCAGAGAACATGTGGTGTAAAT
 
1382
 
 
1383
                                      [+1a]
 
1384
                                      7.4e-07
 
1385
                                      S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..
 
1386
                                      +        +     +     +  +     +     +  +
 
1387
                                      S..R..L..T..P..S..V..F..E..K..L..H..L..S..
 
1388
1608697 TTAATCCGAATTAACAAGAATTTATAACTGTCTCGACTTACCCCGTCTGTTTTCGAAAAATTACACCTGTCA
 
1389
 
 
1390
        
 
1391
        
 
1392
        F..
 
1393
        
 
1394
        S..
 
1395
1608769 AGCGAACCGCTAAATAACTCGTGTGTTTTATTATATTTTTTGACCAATAGAGTTATCAACTAATAAAGGTAT
 
1396
 
 
1397
                                                               [+2b]
 
1398
                                                               9.1e-08
 
1399
                                                               L..E..K..E..V..V.
 
1400
                                                                     +        +
 
1401
                                                               D..R..K..G..H..I.
 
1402
1835569 AGGGAACGCGGAAGTTGGTGGGGCATGTTTTGCTTGGGAGGAGTTCCCATACAAAGATCGTAAAGGCCACAT
 
1403
 
 
1404
        
 
1405
        
 
1406
        .R..V..W..F..C..N..R..R..Q..
 
1407
            +  +  +     +  +  +
 
1408
        .Q..V..W..F..R..N..R..R..G..
 
1409
1835641 TCAAGTGTGGTTTCGAAACAGACGCGGTGAAGGCGTCATTTTCTCCTGCGTATATCGTCAGGATTGTATGAA
 
1410
 
 
1411
                                                                      [+1c]
 
1412
                                                                      5.1e-07
 
1413
                                                                      S..Q..T..T
 
1414
                                                                            +
 
1415
                                                                      K..L..T..S
 
1416
1943569 GTACGACCTGGGACCAAACCGGCCACTTCAAACCTTTAACCCTGATCATATGAGTGTAGAAAAAGCTTACGT
 
1417
 
 
1418
        
 
1419
        
 
1420
        ..I..C..R..F..E..A..L..Q..L..S..F..
 
1421
          +  +  +     +  +  +     +  +
 
1422
        ..I..C..R..S..E..A..L..W..L..T..Q..
 
1423
1943641 CAATCTGCAGAAGCGAGGCTCTATGGTTAACCCAGCAGATGAACCCAAACTTGGATATGCCGCACATCCCCA
 
1424
 
 
1425
                [-2c]
 
1426
                8.8e-07
 
1427
                ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1428
                           +     +  +     +  +  +
 
1429
                ..N..L..S..N..Y..F..W..I..R..V..V..G..M..S..R
 
1430
1949617 CAAAGAGTGTTCAAAGAATTATAAAACCATATCCTCACGACTCCCATAGACCGTTGTTAATTGTTTAAAACA
 
1431
 
 
1432
                                                               [-4b]
 
1433
                                                               6.7e-07
 
1434
                                                               ..E..L..W..K..Q..
 
1435
                                                                    +     +
 
1436
                                                               ..L..L..E..K..*..
 
1437
2088073 CTGGTGGCTGACTCTGATGAAGACGGAACAATATCTTTTCGTGAATTTCTGGACATAATAGTTCTTTTTACA
 
1438
 
 
1439
        
 
1440
        
 
1441
        L..L..P..K..L..K..C..M..N..K
 
1442
        +  +     +  +  +        +  +
 
1443
        L..L..H..K..L..K..K..N..N..K
 
1444
2088145 AAAGGTGCTTCAACTTTTTGTTATTTTTTTTTCCTATTTAATTATTTTTACAATTTGTGACATATTGCAATT
 
1445
 
 
1446
                      [+1c]
 
1447
                      6.0e-07
 
1448
                      S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1449
                      +           +  +        +     +     +  +
 
1450
                      S..T..A..N..I..C..A..Q..E..V..L..*..L..S..L..
 
1451
2221921 TATAATGGCGTCTTTCCACAGCGAACATATGCGCACAGGAGGTCTTATAATTAAGCTTAATTGAGCTTTTGT
 
1452
 
 
1453
                            [-2c]
 
1454
                            3.4e-07
 
1455
                            ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1456
                                             +  +     +  +  +  +        +
 
1457
                            ..N..L..S..I..Y..F..W..I..R..I..V..E..V..S..L
 
1458
2348713 TTTGGCAGTAAACAAAGGATATTCAAAGAAATATAAAACCATATTCTTATAACTTCCACTGACAGCTGTTAG
 
1459
 
 
1460
                                           [+1c]
 
1461
                                           5.7e-07
 
1462
                                           S..Q..T..T..I..C..R..F..E..A..L..Q..L
 
1463
                                           +        +     +     +  +  +  +
 
1464
                                           S..L..D..A..A..S..S..F..E..S..L..P..V
 
1465
2417977 TAGATGCAGCATCCTCTTTTGGATTATTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAG
 
1466
 
 
1467
                                                 [+1c]
 
1468
                                                 5.7e-07
 
1469
        ..S..F..                                 S..Q..T..T..I..C..R..F..E..A..L
 
1470
          +                                      +        +     +     +  +  +  +
 
1471
        ..S..L..                                 S..L..D..A..A..S..S..F..E..S..L
 
1472
2418049 TTTCACTAGATGCAGCATCCTCTTTTGGATCGTTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGC
 
1473
 
 
1474
        
 
1475
        
 
1476
        ..Q..L..S..F..
 
1477
                +
 
1478
        ..P..V..S..L..
 
1479
2418121 TTCCAGTTTCACTAGACGCAGCATCCTCTTTTGGATTATTTCCAGTTTCACTAGATGCAGCATCCCCCTCTG
 
1480
 
 
1481
                      [+1c]
 
1482
                      5.7e-07
 
1483
                      S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1484
                      +        +     +     +  +  +  +        +
 
1485
                      S..L..D..A..A..S..S..F..E..S..L..P..V..S..L..
 
1486
2418193 AATCGTTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAGATGCAGCATCCT
 
1487
 
 
1488
                                                                         [+1c]
 
1489
                                                                         5.7e-07
 
1490
                                                                         S..Q..T
 
1491
                                                                         +
 
1492
                                                                         S..L..D
 
1493
2418337 CATCCCCCTCTGAATCGCTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGGATTATTTCTAGTTTCACTAG
 
1494
 
 
1495
                                                                               [
 
1496
                                                                               5
 
1497
        ..T..I..C..R..F..E..A..L..Q..L..S..F..                                 S
 
1498
          +     +     +  +  +  +        +                                      +
 
1499
        ..A..A..S..S..F..E..S..L..P..V..S..L..                                 S
 
1500
2418409 ATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTATACGCAGCATCCTCTTTTGGATTATTTCCAGTTT
 
1501
 
 
1502
        +1c]
 
1503
        .7e-07
 
1504
        ..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1505
                +     +     +  +  +  +        +
 
1506
        ..L..D..A..A..S..S..F..E..S..L..P..V..S..L..
 
1507
2418481 CACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGGATTATTTC
 
1508
 
 
1509
                                                    [+1c]
 
1510
                                                    5.7e-07
 
1511
                                                    S..Q..T..T..I..C..R..F..E..A
 
1512
                                                    +        +     +     +  +  +
 
1513
                                                    S..L..D..A..A..S..S..F..E..S
 
1514
2418553 CAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGTTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAAT
 
1515
 
 
1516
        
 
1517
        
 
1518
        ..L..Q..L..S..F..
 
1519
          +        +
 
1520
        ..L..P..V..S..L..
 
1521
2418625 CGCTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGTTTCCAGTTTCACTAGATGCAGCATCCTCTT
 
1522
 
 
1523
                                                                            [+1c
 
1524
                                                                            5.7e
 
1525
                                                                            S..Q
 
1526
                                                                            +
 
1527
                                                                            S..L
 
1528
2418841 CAGCATCCTCTTTTGAATTATTTCCAGTTTCACTAGATGCAGCATCCCCCTCTGAATCGCTTCCAGTTTCAC
 
1529
 
 
1530
        ]
 
1531
        -07
 
1532
        ..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1533
             +     +     +  +  +  +        +
 
1534
        ..D..A..A..S..S..F..E..S..L..P..V..S..L..
 
1535
2418913 TAGATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAGATGCAGCATCCCCCTCTGAATCGTTTCCAG
 
1536
 
 
1537
          [+1c]
 
1538
          5.7e-07
 
1539
          S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1540
          +        +     +     +  +  +  +        +
 
1541
          S..L..D..A..A..S..S..F..E..S..L..P..V..S..L..
 
1542
2418985 TTTCACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGC
 
1543
 
 
1544
                                                                [-1c]
 
1545
                                                                2.0e-07
 
1546
                                                                ..F..S..L..Q..L.
 
1547
                                                                  +  +  +  +
 
1548
                                                                ..H..S..L..Q..M.
 
1549
2434465 AGTTTTAGATGTAAAGTTGATTTTTACGATAATAGTTTTTACCACATCCATGTTAAATGGCTTAATTGCATT
 
1550
 
 
1551
        
 
1552
        
 
1553
        .A..E..F..R..C..I..T..T..Q..S
 
1554
         +     +  +     +  +
 
1555
        .S..I..F..R..F..I..T..V..T..Y
 
1556
2434537 GAAATAAATCTGAAAATTGTAACTGTATATTATTAAATACAGTATTAGAAACCATATTCTGTATAATTTAGA
 
1557
 
 
1558
                                                                     [+1b]
 
1559
                                                                     5.7e-07
 
1560
                                                                     S..Q..T..T.
 
1561
                                                                     +        +
 
1562
                                                                     S..L..D..A.
 
1563
2456209 TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTAGTTTCACTAGATGC
 
1564
 
 
1565
        
 
1566
        
 
1567
        .I..C..R..F..E..A..L..Q..L..S..F..
 
1568
            +     +  +  +  +        +
 
1569
        .A..S..S..F..E..S..L..P..V..S..L..
 
1570
2456281 AGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAGACGCAGCATCCTCTTTTGGATTATTTCCAGTTTCACT
 
1571
 
 
1572
                                          [+1b]
 
1573
                                          5.7e-07
 
1574
                                          S..Q..T..T..I..C..R..F..E..A..L..Q..L.
 
1575
                                          +        +     +     +  +  +  +
 
1576
                                          S..L..D..A..A..S..S..F..E..S..L..P..V.
 
1577
2456353 AGATGCAGCATCCCCCTCTGAATCGTTTCCAGTTTCACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAGT
 
1578
 
 
1579
        
 
1580
        
 
1581
        .S..F..
 
1582
         +
 
1583
        .S..L..
 
1584
2456425 TTCACTAGATGCAGCATTCTCTCTTGGATTATTTCCAGTTTCACTAGATGCAGCATTCTCTTTTGAATTATT
 
1585
 
 
1586
                                                                         [+1c]
 
1587
                                                                         4.2e-08
 
1588
                                                                         S..Q..T
 
1589
                                                                         +
 
1590
                                                                         S..L..D
 
1591
2456713 ATCCTCTTTTGAATCGCTTCCAGATTTCACTAGATGCAGCATCCTCTTTTGAATCGCTTCCAGTTTCACTAG
 
1592
 
 
1593
        
 
1594
        
 
1595
        ..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1596
          +     +     +  +  +  +     +  +
 
1597
        ..A..A..S..S..F..E..S..L..S..L..S..L..
 
1598
2456785 ATGCAGCATCCTCTTTTGAATCGCTTTCACTTTCACTAGTTGCAGCATCCCCTTTTGAATCGTTTCCAGTTT
 
1599
 
 
1600
                                                         [-4b]
 
1601
                                                         4.6e-07
 
1602
                                                         ..E..L..W..K..Q..L..L..
 
1603
                                                           +        +     +  +
 
1604
                                                         ..D..P..I..K..I..L..I..
 
1605
2552833 ATTTTTATTAAGAATTAATTTGTTTTGGATAATAAAATTAAAATTGTTAGTCTGGAATCTTAATCAATATAC
 
1606
 
 
1607
        
 
1608
        
 
1609
        P..K..L..K..C..M..N..K
 
1610
           +  +  +        +  +
 
1611
        G..K..L..K..W..F..N..K
 
1612
2552905 CTTTCAACTTCCAAAAGTTTTTTTTCTAAATTCTCTTTTTCTGCAGAAATCGCCTACAATGTAAAATAATGT
 
1613
 
 
1614
                        [-2b]
 
1615
                        4.7e-19
 
1616
                        ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1617
                          +  +  +  +  +  +  +  +  +  +  +  +  +  +  +
 
1618
                        ..Q..R..Q..N..C..F..W..V..R..V..V..N..K..K..L
 
1619
2589409 TCATTCTCTTTTGTTTCTGCCTTTGATTGCAAAACCACACACGCACGACGTTTTTCTTTAAGTCGAGCTTTT
 
1620
 
 
1621
                                            [-4a]
 
1622
                                            5.3e-14
 
1623
                                            ..E..L..W..K..Q..L..L..P..K..L..K..C
 
1624
                                              +  +  +        +  +  +  +  +  +  +
 
1625
                                            ..E..L..W..T..I..L..I..P..K..L..A..V
 
1626
2589769 ATTCTCCATCTTCCTCCTGTGCTCTTCCTCCGCTTTTTCTAACCACGTGATCAAGATTGGTTTCAAGGCGAC
 
1627
 
 
1628
                 [-1a]
 
1629
                 9.3e-09
 
1630
        ..M..N..K..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
1631
          +  +  +  +  +  +  +  +  +  +  +  +           +
 
1632
        ..M..N..N..H..S..L..T..L..S..E..F..R..H..V..C..S..*..I
 
1633
2589841 CATGTTGTTGTGACTGAGTGTCAAGGACTCAAACCTGTGCACACAACTTTATATTAAGCACATTATACTTCA
 
1634
 
 
1635
                                                                         [-3c]
 
1636
                                                                         3.3e-17
 
1637
                                                                         ..V..D.
 
1638
                                                                           +  +
 
1639
                                                                         ..V..D.
 
1640
2589985 CTGCAAATTGTGCTTTGGCTCAGCGATCCAACACCCGGTAGCTTGAGGTTGGCAAGAGCTTGCCCAACATCA
 
1641
 
 
1642
        
 
1643
        
 
1644
        .A..Q..T..F..G..L..K..I..R..R..Q..K..F
 
1645
            +  +  +  +  +  +  +  +  +  +  +  +
 
1646
        .N..Q..T..V..G..L..K..I..R..R..Q..K..F
 
1647
2590057 TTCTGCGTCACTCCAAGTTTAATGCGTCGCTGCTTGAATCTGAAACAATATTGATCCTGGGTAAGTGGCTGT
 
1648
 
 
1649
                   [-1c]
 
1650
                   5.6e-08
 
1651
                   ..F..S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
1652
                        +  +     +  +     +  +  +  +           +
 
1653
                   ..Y..T..L..*..L..A..V..F..R..S..I..P..I..T..S
 
1654
2608273 AATCAACCACAGTACGTTAACTACAAAGCCACAAACCTCGAAATCGGAATCGTTGATAAGGTCAGTGATACC
 
1655
 
 
1656
                                              [-2c]
 
1657
                                              6.2e-07
 
1658
                                              ..Q..R..R..N..C..F..W..V..R..V..V.
 
1659
                                                   +           +     +  +  +
 
1660
                                              ..R..R..K..P..T..F..R..V..R..I..P.
 
1661
2783161 TCTGTCTCTTCATGCTCACTGGAAGAGTATGTCCTCACTCTCCTCTTTGGAGTAAATCTCACTCTTATAGGC
 
1662
 
 
1663
        
 
1664
        
 
1665
        .E..K..E..L
 
1666
            +  +  +
 
1667
        .M..K..K..L
 
1668
2783233 ATCTTTTTTAACCGTTCTTTCTTGATTGAAGAAACATCTGTAGAACCTCCAGCAGAGACATTTAAACTGGCC
 
1669
 
 
1670
                                                                    [+1a]
 
1671
                                                                    4.3e-07
 
1672
                                                                    S..Q..T..T..
 
1673
                                                                    +     +
 
1674
                                                                    S..N..T..Y..
 
1675
2821969 CGTAATATTTGATAAGCCCTGAGGTACAAATTATTGAATTAAAATCAGACCCTTTTTTTTTCAAACACATAT
 
1676
 
 
1677
        
 
1678
        
 
1679
        I..C..R..F..E..A..L..Q..L..S..F..
 
1680
        +  +     +     +     +  +  +
 
1681
        I..S..L..F..F..S..Q..N..L..S..S..
 
1682
2822041 ATATCTCTGTTTTTTTCACAAAACTTAAGCTCATTTCATCAGAAAAAATCCAACTCTGCGAAATGTTTCAAC
 
1683
 
 
1684
                                                            [+2b]
 
1685
                                                            5.7e-07
 
1686
                                                            L..E..K..E..V..V..R.
 
1687
                                                            +     +        +  +
 
1688
                                                            M..*..R..F..F..I..R.
 
1689
2862145 CCTAAATCGAGCTGTCTGAACGTTACAGCAACAGACACAATGTCTTAAAGGCATGTGACGTTTCTTTATACG
 
1690
 
 
1691
        
 
1692
        
 
1693
        .V..W..F..C..N..R..R..Q..
 
1694
               +  +  +        +
 
1695
        .L..S..F..C..N..N..K..Q..
 
1696
2862217 GTTGTCTTTCTGCAACAACAAGCAAGTCGAGCGTGGTGCCGGTGTTAGCTGGGATGTCCTACACCAAATATG
 
1697
 
 
1698
                                             [-1b]
 
1699
                                             1.5e-07
 
1700
                                             ..F..S..L..Q..L..A..E..F..R..C..I..
 
1701
                                               +  +  +  +        +  +  +
 
1702
                                             ..F..S..L..N..Y..Y..E..F..R..*..R..
 
1703
3009889 TATTCATTGCTGTATGACCTATGCACCTATGGAATTTAAAAGAAAGGTTGTAATATTCAAACCTTCATCTTG
 
1704
 
 
1705
        
 
1706
        
 
1707
        T..T..Q..S
 
1708
           +  +
 
1709
        S..T..Q..L
 
1710
3009961 AGGTCTGCAACATCGGCCATAAATTCTCCAGCGACAGTCTCAAGTGCCATTGCATTTGCGAGTCCATTCATT
 
1711
 
 
1712
               [+2b]
 
1713
               6.0e-07
 
1714
               L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1715
               +           +     +     +  +     +
 
1716
               M..V..Q..G..V..L..R..I..W..F..Y..N..S..L..N..
 
1717
3132361 ATTAACAATGGTTCAGGGAGTTCTGAGGATTTGGTTTTATAATTCTTTGAATGTTCTCTGTTTACTATCGAA
 
1718
 
 
1719
                                   [+4a]
 
1720
                                   9.3e-07
 
1721
                                   K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1722
                                   +     +  +        +     +  +     +     +  +
 
1723
                                   K..V..M..I..N..I..K..I..L..L..M..K..I..L..N..
 
1724
3177865 AATTGAAAACCTTAAGGTGTTAACATAAAGGTCATGATAAACATAAAAATCCTATTAATGAAAATATTAAAT
 
1725
 
 
1726
                                              [+1c]
 
1727
                                              8.0e-07
 
1728
                                              S..Q..T..T..I..C..R..F..E..A..L..Q
 
1729
                                                    +  +  +  +  +  +
 
1730
                                              V..L..T..T..I..C..R..F..D..D..I..*
 
1731
3252745 TTATAGCAACACTATAGCAACGTTGTTATTGCTTTGTTGTGCTGACTACTATATGTCGTTTTGATGACATTT
 
1732
 
 
1733
        
 
1734
        
 
1735
        ..L..S..F..
 
1736
          +     +
 
1737
        ..L..E..F..
 
1738
3252817 AATTGGAATTTTGTAAATTCTAAGAAATCGCGTAATCTGTAAAGTGTTTTGATAAATCAGTTTTGCACCCGT
 
1739
 
 
1740
                                                                  [+3b]
 
1741
                                                                  6.8e-07
 
1742
                                                                  F..K..Q..R..R.
 
1743
                                                                  +  +  +  +
 
1744
                                                                  F..K..Q..R..K.
 
1745
3276001 CCTGAACGCGAAACTACAGTTTCGTATTTTGTCTGGCTTTTGAACACGTCCACGAGGTTTTAAACAACGTAA
 
1746
 
 
1747
        
 
1748
        
 
1749
        .I..K..L..G..F..T..Q..A..D..V..
 
1750
         +  +        +     +     +
 
1751
        .I..K..R..F..F..*..Q..*..D..S..
 
1752
3276073 GATTAAAAGATTTTTTTAACAGTAGGATTCTGCAACTTGCAGTTAATTATCTACCGAAATTAATCGACTGTG
 
1753
 
 
1754
                                                    [-4c]
 
1755
                                                    1.7e-07
 
1756
                                                    ..E..L..W..K..Q..L..L..P..K.
 
1757
                                                      +     +     +  +  +
 
1758
                                                    ..N..*..W..T..E..L..V..I..T.
 
1759
3314305 TTAAGTAAACTATATATGCCACATACACATACAACAACATATTTATTCTACCATGTTTCTAACACAATAGTT
 
1760
 
 
1761
        
 
1762
        
 
1763
        .L..K..C..M..N..K
 
1764
         +  +     +  +
 
1765
        .L..K..Y..M..N..D
 
1766
3314377 AACTTATACATGTTATCAACTAACAACCTATAATATACCTTAACCTATCATATCCAGGTCAAAAAGTAGGAT
 
1767
 
 
1768
             [-2c]
 
1769
             8.8e-07
 
1770
             ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1771
                     +  +  +        +  +  +     +  +
 
1772
             ..W..K..R..N..C..V..L..V..R..V..F..E..K..C..H
 
1773
3466585 AGCTCCCACTTACGGTTACAAACTAAAACACGAACGAATTCCTTACAGTGAGAGAGAGAGAGAGAGAGCGAT
 
1774
 
 
1775
              [+2a]
 
1776
              1.4e-07
 
1777
              L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1778
                          +  +  +     +  +  +  +
 
1779
              R..P..I..G..V..V..R..I..W..F..C..N..S..L..I..
 
1780
3771289 TAACAACGGCCTATAGGAGTTGTAAGGATATGGTTTTGTAATTCTTTGATTTTTTGTTTACCACAAAATGGG
 
1781
 
 
1782
                                          [-4b]
 
1783
                                          3.5e-07
 
1784
                                          ..E..L..W..K..Q..L..L..P..K..L..K..C..
 
1785
                                            +  +  +     +  +  +        +  +  +
 
1786
                                          ..N..V..W..S..S..L..L..N..S..L..K..I..
 
1787
3936961 TGACAACGCCGACGAGCTGCACAAAATTAAACGAATTCACCCAACTGGAAAGTAAATTACTCAGTTTAATTT
 
1788
 
 
1789
        
 
1790
        
 
1791
        M..N..K
 
1792
              +
 
1793
        E..Q..K
 
1794
3937033 CTTGCTTCCGTCATTTTGAAATGAATTCTTTGTATGTGGCAGGTTACTCCTGCGATTACGGGTAGAATACTG
 
1795
 
 
1796
                                                                               [
 
1797
                                                                               8
 
1798
                                                                               .
 
1799
        
 
1800
                                                                               .
 
1801
3975409 TTAATACAATATCTAGTTAACCACTTGTATGTGTTTCATTATTGTCACCTAGTTTTCTTATTTCACTCCCCC
 
1802
 
 
1803
        -4c]
 
1804
        .5e-07
 
1805
        .E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
1806
            +        +  +  +  +  +  +     +
 
1807
        .V..L..P..S..A..L..L..P..K..L..T..Q..S..G..S
 
1808
3975481 ACCAGTGGCGAAGCCAGAAGGGGCTTTAAGGTTTGCGACCCACTTTAAAAAAAAGTTGTTGTTTTTTTGTAA
 
1809
 
 
1810
                                                    [+1c]
 
1811
                                                    9.9e-07
 
1812
                                                    S..Q..T..T..I..C..R..F..E..A
 
1813
                                                    +        +  +  +     +     +
 
1814
                                                    S..V..K..A..I..C..E..F..T..S
 
1815
3997297 AATGGGCATGGTAACTAATTTGGACAATAATATAGAACAAGGGTTCTGTAAAAGCAATATGTGAATTCACCT
 
1816
 
 
1817
        
 
1818
        
 
1819
        ..L..Q..L..S..F..
 
1820
          +  +        +
 
1821
        ..L..N..R..A..F..
 
1822
3997369 CATTAAATCGAGCATTCAAACGACTTCTTGACCCACCTGAAACATTCGTTCCTTTTTGTACTTCTTGCCTGT
 
1823
 
 
1824
                                     [-2c]
 
1825
                                     6.8e-07
 
1826
                                     ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E.
 
1827
                                                +     +  +     +  +  +
 
1828
                                     ..R..K..F..N..S..F..W..I..R..V..V..G..I..S.
 
1829
4022857 TTTTCGTCCCATTTGATAGTAAGCAAAAAACGTTTAAAATTAGAAAACCATATCCTCACGACTCCAATAGAC
 
1830
 
 
1831
        
 
1832
        
 
1833
        .L
 
1834
        
 
1835
        .R
 
1836
4022929 CGCTAATAACTGTTTACAACACGATCAGAATATTTGGATATCATGTTCCAAAGGTGTTCCGTCTCCCCCCAT
 
1837
 
 
1838
                                                              [+3a]
 
1839
                                                              7.1e-07
 
1840
                                                              F..K..Q..R..R..I..
 
1841
                                                                    +  +
 
1842
                                                              *..L..I..K..K..M..
 
1843
4358881 TCAGTCATGCCAAAAAAGACGCAAAACAAACAATCACCATCAAAGTTCCATGAGTAACTTATAAAAAAGATG
 
1844
 
 
1845
        
 
1846
        
 
1847
        K..L..G..F..T..Q..A..D..V..
 
1848
        +  +     +  +     +  +  +
 
1849
        K..L..C..F..T..T..T..D..V..
 
1850
4358953 AAATTGTGTTTTACAACTACTGACGTTGCCCAGTAACCCAAGGTTATATAAATGTCATTCATTTATGCAATC
 
1851
 
 
1852
                                                           [-4a]
 
1853
                                                           9.8e-07
 
1854
                                                           ..E..L..W..K..Q..L..L
 
1855
                                                             +     +  +  +     +
 
1856
                                                           ..E..K..W..K..A..R..L
 
1857
4682161 CATTTGAAAAAAGTCTACTTTAAACCGCTTGTAATGTTTTCATTCTCTTTCCTCTTTCCATTTGGCCCGGAG
 
1858
 
 
1859
        
 
1860
        
 
1861
        ..P..K..L..K..C..M..N..K
 
1862
                +     +     +  +
 
1863
        ..G..F..L..T..I..L..N..N
 
1864
4682233 TCCAAAAAGCGTTATTAAATTGTTTAAAACATGATCAGCAGGAAATAGCAGATTTAGGTGCTAAGGGAATAT
 
1865
 
 
1866
                            [+2c]
 
1867
                            2.2e-07
 
1868
                            L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1869
                            +        +  +  +  +        +     +
 
1870
                            L..N..M..E..V..V..R..I..R..F..Y..N..S..L..N..
 
1871
4689505 TATCTAAATATCTTCGAATTTTAAACATGGAGGTTGTGAGGATCCGGTTTTACAACTCTTTGAATGTTCTTT
 
1872
 
 
1873
                             [+4a]
 
1874
                             9.3e-07
 
1875
                             K..N..M..C..K..L..K..P..L..L..Q..K..W..L..E..
 
1876
                             +  +     +  +           +  +     +  +  +
 
1877
                             N..S..T..V..A..M..N..Q..L..L..K..R..W..L..H..
 
1878
4736593 CACTAGAAGCTTTGGTGCGTCAACTCAACTGTTGCCATGAACCAACTCTTAAAGCGATGGTTACACAGCTCA
 
1879
 
 
1880
                                                     [-2a]
 
1881
                                                     3.0e-07
 
1882
                                                     ..Q..R..R..N..C..F..W..V..R
 
1883
                                                             +  +  +  +  +
 
1884
                                                     ..S..Y..R..N..C..F..W..I..S
 
1885
4778065 AAAGCTAACAGGCAAACATATCATTGCCTACATAGTTTTATAAATGGAGTAACGATTACAGAACCAGATGCT
 
1886
 
 
1887
        
 
1888
        
 
1889
        ..V..V..E..K..E..L
 
1890
             +  +
 
1891
        ..S..V..D..I..Y..H
 
1892
4778137 GCTAACATCGATATAATGTAGATGTTTTTGGGTCCAAACACTTCAACGGCTCCAAATGAAATTAGATAAGCA
 
1893
 
 
1894
                 [+2a]
 
1895
                 7.4e-07
 
1896
                 L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
1897
                 +     +  +  +              +  +        +
 
1898
                 Y..Q..K..N..V..K..N..I..K..F..C..S..K..R..K..
 
1899
4844449 ATATGAAAATACCAAAAAAATGTGAAAAATATAAAATTCTGTTCTAAACGAAAATACAAAAAAATATTAAAA
 
1900
 
 
1901
                    [+1a]
 
1902
                    8.0e-07
 
1903
                    S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
1904
                    +           +  +     +     +     +  +  +  +
 
1905
                    S..L..F..S..I..S..F..F..L..A..E..N..I..S..F..
 
1906
4874833 TATCTCAAAATCTCTCTCTTTAGCATTAGCTTTTTCCTTGCTGAAAATATCTCATTTTCTTTTGCAGGTTAA
 
1907
 
 
1908
                                          [-4b]
 
1909
                                          4.6e-07
 
1910
                                          ..E..L..W..K..Q..L..L..P..K..L..K..C..
 
1911
                                            +  +  +     +  +           +  +
 
1912
                                          ..D..L..W..L..E..L..A..Q..A..L..A..D..
 
1913
4915513 GTGACTTCTGGTTTAAAAGTTGGGGTGACATGCGATCAAGCCAGAGCTCTAAAGCTTGTGCCAGAGCGTCTG
 
1914
 
 
1915
        
 
1916
        
 
1917
        M..N..K
 
1918
        +  +  +
 
1919
        A..N..K
 
1920
4915585 CATTTTTGACTCCTGTCATTTGGCGTAAAGTAAAGACAGCGTCGAGTCATATGCAATTGCTATAATGTTGCA
 
1921
 
 
1922
                            [-2c]
 
1923
                            3.4e-07
 
1924
                            ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1925
                                 +     +     +  +     +  +  +
 
1926
                            ..M..R..S..N..Y..F..W..I..R..I..V..R..N..I..T
 
1927
5095873 TGGTAGTAAACAATAAAGAACATACGAGAATTGTAAAACCATATCCTAATGACCCTGTTAATTGTTTAAAAC
 
1928
 
 
1929
                                                                      [-2c]
 
1930
                                                                      2.6e-07
 
1931
                                                                      ..Q..R..R.
 
1932
        
 
1933
                                                                      ..L..S..S.
 
1934
5131081 TAGGGTGGGGGAAGGTGGGACACATTTTCCTTCTATATTATCTCCACCCATTCGGTAGTAAACAAAGAAGAA
 
1935
 
 
1936
        
 
1937
        
 
1938
        .N..C..F..W..V..R..V..V..E..K..E..L
 
1939
         +     +  +     +  +  +           +
 
1940
        .N..Y..F..W..S..R..V..V..K..M..S..L
 
1941
5131153 TTATAAAACCATGATCTCACGACTTTCATAGACAGTTGTTAATGATTTAAAACACGATCAGGATATTTAGAC
 
1942
 
 
1943
                                     [-2c]
 
1944
                                     1.6e-07
 
1945
                                     ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E.
 
1946
                                                +  +  +  +     +  +     +
 
1947
                                     ..N..L..S..N..C..F..W..I..R..V..A..E..M..S.
 
1948
5190769 TCATTTGGTGAACACAGTCAAAACAGAACATTCAAAGAATTGCAAAACCATATCCTCACGGCTTCCATAGAC
 
1949
 
 
1950
        
 
1951
        
 
1952
        .L
 
1953
        
 
1954
        .R
 
1955
5190841 CGTTGTACTACAATCAGGATATTTGCATATTATTTGCTAAAGGTGCTTGTTTTACCTCAACCTACTGTATAT
 
1956
 
 
1957
                                                                        [+1b]
 
1958
                                                                        8.4e-07
 
1959
                                                                        S..Q..T.
 
1960
                                                                              +
 
1961
                                                                        Y..N..T.
 
1962
5193001 TGGATGTTGTGTTGACTGCTTGCATGATAACTGTGTTTGTAACCCGACACAACACTGAGCAAAATACAATAC
 
1963
 
 
1964
        
 
1965
        
 
1966
        .T..I..C..R..F..E..A..L..Q..L..S..F..
 
1967
         +  +  +     +  +  +  +           +
 
1968
        .T..I..S..L..F..E..N..L..L..K..I..F..
 
1969
5193073 AACAATCTCATTATTTGAAAATCTATTAAAAATATTTTTTGTTAATTCTTTCCAAGTACACTGACTGAAAAC
 
1970
 
 
1971
                                                                             [-2
 
1972
                                                                             5.5
 
1973
                                                                             ..Q
 
1974
        
 
1975
                                                                             ..T
 
1976
5194441 TTTGTGAAGTATTGCTGTAATTTTTTATCAGTCACGTTTCTGTACTAGTCAAAGTTTAGGAATAGGAATTGT
 
1977
 
 
1978
        a]
 
1979
        e-07
 
1980
        ..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1981
                +     +        +  +        +     +
 
1982
        ..E..P..N..T..F..I..I..R..V..T..K..K..Q..M
 
1983
5194513 TTCTGGGTTTGTAAAAATAATTCTGACTGTTTTTTTTTGCATTTGATGGTGCAGCTATTATTAGGTTTGCAT
 
1984
 
 
1985
             [-2c]
 
1986
             6.3e-08
 
1987
             ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1988
                              +  +  +  +  +  +  +        +
 
1989
             ..N..F..Y..E..Y..F..W..V..R..V..V..E..T..T..L
 
1990
5247721 AGAACATTAAAATATTCATAAAACCACACCCTTACGACTTCGGTTGTTAACTTTTTTAAACACGACTAGGCT
 
1991
 
 
1992
                            [-2c]
 
1993
                            8.8e-07
 
1994
                            ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
1995
                                       +     +  +     +  +  +
 
1996
                            ..N..L..S..N..Y..F..W..I..R..V..V..G..M..S..R
 
1997
5423617 TTTTGTAGTAAACAAAGAACATTCAACGAATTATAAAACCATATTCTCACGACTCCCATAGACCGTTGTTAA
 
1998
 
 
1999
                                                                   [-2c]
 
2000
                                                                   4.0e-07
 
2001
                                                                   ..Q..R..R..N.
 
2002
                                                                              +
 
2003
                                                                   ..Y..L..S..N.
 
2004
5586049 AGGGCGGGGGAAGATGGGACACCTTTTTATTCTATTCCATTTGGCCGTACACAAAGAATGTACAAAGAATTA
 
2005
 
 
2006
        
 
2007
        
 
2008
        .C..F..W..V..R..V..V..E..K..E..L
 
2009
            +  +  +  +  +  +
 
2010
        .Y..F..W..V..R..V..V..R..M..P..R
 
2011
5586121 TAAAACCAAACCCTCACAACTCTCATAGGCCGTTGTCAATTGTTTAAAACATGATCAGGGTATGTGAACTTT
 
2012
 
 
2013
                                   [+2a]
 
2014
                                   1.6e-08
 
2015
                                   L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
2016
                                   +  +           +  +     +  +     +
 
2017
                                   L..E..L..*..L..V..R..I..W..F..Y..N..S..L..N..
 
2018
5657041 GTGTTTTAAACAAATAACAACAGTCTATTAGAGTTGTGACTTGTGAGGATATGGTTTTATAATTCTTTGAAT
 
2019
 
 
2020
                                          [-1b]
 
2021
                                          4.1e-07
 
2022
                                          ..F..S..L..Q..L..A..E..F..R..C..I..T..
 
2023
                                            +  +  +  +     +  +     +  +  +
 
2024
                                          ..F..S..I..D..A..N..E..T..R..C..I..S..
 
2025
5690089 AAATAATCCACAAAAACAAGTTGAACTTTAGCACGAATGAAATATCCGCGTTTTCAGTTCGACATATACTAC
 
2026
 
 
2027
        
 
2028
        
 
2029
        T..Q..S
 
2030
        
 
2031
        R..P..C
 
2032
5690161 GTGGACAGCGGTGACAAATACATTTTGCTAATTTGTTGCGTAAACAAAAATATCTCTATAGTAGATATCGGT
 
2033
 
 
2034
                                                                              [+
 
2035
                                                                              2.
 
2036
                                                                              S.
 
2037
        
 
2038
                                                                              I.
 
2039
5829121 CCTATATATACCCTTTAATTCAATAAGTGTAGTCAATATAAAATATATAAAAACTTTGTAATTTGAACAGAT
 
2040
 
 
2041
        1b]
 
2042
        9e-08
 
2043
        .Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
2044
            +  +  +  +     +     +  +  +     +  +
 
2045
        .A..T..A..I..S..S..F..S..S..L..N..P..S..F..
 
2046
5829193 CGCGACGGCAATTTCGTCATTTAGTTCCCTGAATCCATCGTTTCGAAAAATTAAAAATCAAAGGAAACTACC
 
2047
 
 
2048
                                                      [-2b]
 
2049
                                                      4.8e-08
 
2050
                                                      ..Q..R..R..N..C..F..W..V..
 
2051
                                                                 +     +  +
 
2052
                                                      ..K..Q..S..N..Y..F..W..I..
 
2053
6077593 AAAATGTGACACCTTTTTGTTCGATTTTCTTGTCCCGTTTTTAATTTTTTTGTGAATTATAAAACCATATTC
 
2054
 
 
2055
        
 
2056
        
 
2057
        R..V..V..E..K..E..L
 
2058
        +  +  +           +
 
2059
        R..V..V..G..I..S..Y
 
2060
6077665 TAACGACTCCTATGGAGTAGTATTAATTGTTTGAAACACGATTAATACATTTGAATATTATACAATAAATGT
 
2061
 
 
2062
                                             [+2b]
 
2063
                                             4.8e-07
 
2064
                                             L..E..K..E..V..V..R..V..W..F..C..N.
 
2065
                                                +  +     +  +  +        +     +
 
2066
                                             *..E..K..L..V..V..R..L..*..F..T..N.
 
2067
6179905 AACAAATATATCAAACCTTTTTGCAACAACTTAATATTAAGAAAAATTAGTAGTAAGGCTTTAGTTTACCAA
 
2068
 
 
2069
        
 
2070
        
 
2071
        .R..R..Q..
 
2072
        
 
2073
        .K..N..L..
 
2074
6179977 CAAAAACTTATTATTTTAAAGTTGAAATAAGATTACTTACTGTAAACAATTTAAAAAAAGGAACGAATAATT
 
2075
 
 
2076
                                                                [-4c]
 
2077
                                                                2.9e-07
 
2078
                                                                ..E..L..W..K..Q.
 
2079
                                                                     +  +  +  +
 
2080
                                                                ..L..L..W..A..E.
 
2081
6193225 CAGTATATGGTTAAACTTGAACAAACATAAATGGCTCGTTGTTTGTCTTCTAGGTGTAGCAACCACGCTTCT
 
2082
 
 
2083
        
 
2084
        
 
2085
        .L..L..P..K..L..K..C..M..N..K
 
2086
                  +  +        +  +  +
 
2087
        .K..K..L..K..L..Q..F..M..N..K
 
2088
6193297 TTTTTTAACTTTAATTGAAACATGTTTTTACCTGTAAGCGCTTTAACAACCGTTATTTTAGTGCTACATTCT
 
2089
 
 
2090
                              [+2b]
 
2091
                              4.6e-08
 
2092
                              L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
2093
                              +     +  +           +  +  +        +  +
 
2094
                              L..T..R..N..F..A..T..V..W..F..T..T..Q..R..H..
 
2095
6278401 AATTAATGCGCACGTATTTGCTTTGACAAGAAATTTCGCAACCGTGTGGTTCACTACCCAGCGTCACTTCCC
 
2096
 
 
2097
                                                                              [-
 
2098
                                                                              2.
 
2099
                                                                              ..
 
2100
        
 
2101
                                                                              ..
 
2102
6291793 ATAATTGTTTTCCAGGCTGCTTGCAAACTTGTGAAAACTGTAGACACCAAATCTTTGACATCAATCTTCTAT
 
2103
 
 
2104
        4b]
 
2105
        3e-07
 
2106
        E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
2107
              +     +  +  +        +  +  +     +
 
2108
        H..Q..W..*..E..L..L..S..G..L..K..C..L..S..H
 
2109
6291865 GCTGCCACTACTCAAGCAGAGATCCCAGCTTGCAAAGTGAGTGCCTTTTTCTTGAGTCACTTAATCCCCACA
 
2110
 
 
2111
                              [-2b]
 
2112
                              1.3e-07
 
2113
                              ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
2114
                                         +        +     +  +     +  +  +  +
 
2115
                              ..N..V..S..N..*..L..W..I..R..I..A..N..R..K..L
 
2116
6509809 TATTCGGTAGTGGACATAGAACATTTACAGAGTTTTACAACCATATCCTTATGGCATTTCTTTTCAAATCAC
 
2117
 
 
2118
                                         [-2a]
 
2119
                                         9.6e-07
 
2120
                                         ..Q..R..R..N..C..F..W..V..R..V..V..E..K
 
2121
                                           +  +     +  +  +                 +  +
 
2122
                                         ..Q..R..F..N..C..F..F..L..*..Y..*..N..K
 
2123
6762673 AACAAAAAGAAAAAAAAGAGGGAACACTAACTACTGTCTAAAGTTACAAAAAAACAACTAATATTAATTTTT
 
2124
 
 
2125
        
 
2126
        
 
2127
        ..E..L
 
2128
          +
 
2129
        ..K..F
 
2130
6762745 TTTAAAAGGAAACACTTTCCGCTTGACCACACACTGAGGTAATATGATATCCCATTGTGATGGAATAAACCT
 
2131
 
 
2132
                                        [-3c]
 
2133
                                        7.1e-07
 
2134
                                        ..V..D..A..Q..T..F..G..L..K..I..R..R..Q.
 
2135
                                          +        +  +  +     +  +        +
 
2136
                                        ..V..R..*..Q..T..V..I..L..K..F..L..K..L.
 
2137
6803065 AGTATTTTGATTAACCCTTAGAAGTTGTGCTTAACTCTTCACTGTGTAACAATCAATTTAAATAATTTAAGT
 
2138
 
 
2139
        
 
2140
        
 
2141
        .K..F
 
2142
         +  +
 
2143
        .K..L
 
2144
6803137 TTTAGACCTCTTTGTCAATCGCTTAAATAATGCTATTTGTTTATTTATAATGTAATATATATAATATGTTAT
 
2145
 
 
2146
                                                                        [+1b]
 
2147
                                                                        9.5e-07
 
2148
                                                                        S..Q..T.
 
2149
                                                                           +
 
2150
                                                                        Y..Q..L.
 
2151
6812857 GGTCAAATCCTGATAGTGATACATTATAAAGTAAGTTTCCTGTTTCTTTCATTAATATTTATGGTATCAATT
 
2152
 
 
2153
        
 
2154
        
 
2155
        .T..I..C..R..F..E..A..L..Q..L..S..F..
 
2156
            +     +  +        +  +  +     +
 
2157
        .*..I..N..R..F..D..K..L..Q..I..*..F..
 
2158
6812929 ATGAATAAATCGATTTGATAAGCTTCAAATATAATTCAACTATGGCAGATAAATTTAATTATGTACTTGTGA
 
2159
 
 
2160
                                                                           [-1b]
 
2161
                                                                           9.9e-
 
2162
                                                                           ..F..
 
2163
                                                                             +
 
2164
                                                                           ..F..
 
2165
6828697 CTAAGGATGCATTATTACTTTAATTTCAATTATGTCTTACTTAAAGCTATAACACGTCGTATACCCTAAAAA
 
2166
 
 
2167
        
 
2168
        07
 
2169
        S..L..Q..L..A..E..F..R..C..I..T..T..Q..S
 
2170
              +     +     +  +  +  +     +
 
2171
        F..C..N..*..A..L..F..R..C..I..Q..T..N..N
 
2172
6828769 AACAATTCTACGCCAAAAATCGACATATCTGCGTGTTATTTTATCCAATGCTTATTTGTAAACAAAACTATC
 
2173
 
 
2174
                                   [+1a]
 
2175
                                   2.0e-07
 
2176
                                   S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
2177
                                               +  +     +     +     +  +  +  +
 
2178
                                   N..L..A..R..I..C..N..F..C..S..Q..Q..L..S..F..
 
2179
6845617 TGCACGCATGGCCTGTAATGTAAACCAAATTTAGCTCGAATTTGTAATTTTTGTTCACAACAGCTTAGTTTT
 
2180
 
 
2181
                                      [-2a]
 
2182
                                      6.2e-07
 
2183
                                      ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E
 
2184
                                                 +     +        +  +  +  +
 
2185
                                      ..N..L..F..N..Y..F..Q..I..R..V..V..E..V..F
 
2186
6877513 TCTAGTCCCATTTGGTGGTACACAAACAACATTCAAAAAATTATAAAACTGTATTCTCACGACTTCAACAAA
 
2187
 
 
2188
        
 
2189
        
 
2190
        ..L
 
2191
          +
 
2192
        ..L
 
2193
6877585 CAGTTGTTAATTGTTTAAAACTTGATCACAATATTTGAATATGATGTGCTAACGGTGTCCCATCTTACCCCA
 
2194
 
 
2195
                                                              [+2a]
 
2196
                                                              8.8e-07
 
2197
                                                              L..E..K..E..V..V..
 
2198
                                                                          +  +
 
2199
                                                              R..S..M..G..V..V..
 
2200
6881401 ATTAAAAAAAATTCTTGCCAAAGAGCCAAAATGCATCCTGATAACATTTACCAAAGGTCTATGGGAGTAGTA
 
2201
 
 
2202
        
 
2203
        
 
2204
        R..V..W..F..C..N..R..R..Q..
 
2205
        +     +  +     +
 
2206
        R..I..W..F..Y..N..S..L..N..
 
2207
6881473 AGGATATGGTTTTATAATTCTTTAAATATTCTTTGTTTACTTCCAAATGGGAGGAGAAAATACAATGAAAAG
 
2208
 
 
2209
                           [+1b]
 
2210
                           6.5e-07
 
2211
                           S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
2212
                           +     +  +     +  +  +        +        +
 
2213
                           S..*..S..T..D..C..R..F..V..K..L..*..Y..T..V..
 
2214
6909481 AACTAGATATTAGATTAGGTCATGAAGTACTGACTGTAGATTTGTGAAGCTGTGATACACGGTGAAAGTTGT
 
2215
 
 
2216
                              [+2b]
 
2217
                              9.2e-07
 
2218
                              L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
2219
                              +        +     +  +        +     +
 
2220
                              M..A..M..E..L..V..R..I..R..F..Y..N..S..L..K..
 
2221
6924457 ACATCGTTTTTTACAATTAACAATGGCTATGGAACTCGTGAGGATACGGTTTTATAATTCTTTGAAGTTTCT
 
2222
 
 
2223
                                                           [+4a]
 
2224
                                                           6.1e-07
 
2225
                                                           K..N..M..C..K..L..K..
 
2226
                                                           +     +        +
 
2227
                                                           K..L..A..S..*..L..A..
 
2228
6943105 TTTTTTTAATTAGTACCCTTTTTTTACTTTTTAAAACTGTTTTATTCCTAAAAACTAGCTTCCTAGCTGGCA
 
2229
 
 
2230
        
 
2231
        
 
2232
        P..L..L..Q..K..W..L..E..
 
2233
           +  +        +  +  +
 
2234
        S..L..L..H..I..W..L..E..
 
2235
6943177 TCACTGCTACATATCTGGTTGGAAACACTGTATTTTTCCTTTTTAATCTTCCTAGGAACAACATGTTTTTCA
 
2236
 
 
2237
                                                [+2b]
 
2238
                                                8.0e-08
 
2239
                                                L..E..K..E..V..V..R..V..W..F..C.
 
2240
                                                +        +     +     +  +
 
2241
                                                L..*..M..N..I..V..S..V..W..V..Y.
 
2242
6997681 AACTTCTAAACCAGTGAGGAAAACAGTTGAAAGGATTAAATTATAGATGAATATTGTGTCTGTTTGGGTATA
 
2243
 
 
2244
        
 
2245
        
 
2246
        .N..R..R..Q..
 
2247
         +  +  +
 
2248
        .N..R..R..K..
 
2249
6997753 TAATCGAAGAAAAGCAATGTTTTACGGTTTATTATTGTATATTTTTACAAAGAGAGCGTTTTTTACTAAGAC
 
2250
 
 
2251
                                                                   [+1c]
 
2252
                                                                   2.3e-07
 
2253
                                                                   S..Q..T..T..I
 
2254
                                                                   +        +  +
 
2255
                                                                   S..A..A..A..I
 
2256
7051609 TTTTAACGTATCAACTTCAATGCAACCCCAAAGGATCGTTTATTCAATAAAACTAGTTCAGCGCGGCCGCCA
 
2257
 
 
2258
        
 
2259
        
 
2260
        ..C..R..F..E..A..L..Q..L..S..F..
 
2261
          +     +        +  +     +
 
2262
        ..C..S..F..*..K..L..Q..F..T..M..
 
2263
7051681 TATGTTCGTTTTAAAAACTTCAATTTACAATGAAATGGTTTTCCCTTCATTACCACAATACCCTTGTGCCAA
 
2264
 
 
2265
                                                    [-2c]
 
2266
                                                    2.2e-07
 
2267
                                                    ..Q..R..R..N..C..F..W..V..R.
 
2268
                                                               +     +  +  +
 
2269
                                                    ..N..L..S..N..*..F..W..V..S.
 
2270
7250617 TTTTTATTCTGTTTTCTCGTCCTATTTAATAGTAAACAAAGAACATTCAAAGAATTTTAAAACCATACGCTC
 
2271
 
 
2272
        
 
2273
        
 
2274
        .V..V..E..K..E..L
 
2275
         +  +  +
 
2276
        .V..V..E..M..S..R
 
2277
7250689 ACGACTTCCATAGACCGTTGTTAATTGTTTAAACACGATCAGATTATTCAGATATTATGTGCCAAAAGTGTC
 
2278
 
 
2279
                        [+1b]
 
2280
                        6.0e-07
 
2281
                        S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
2282
                                    +  +  +  +     +     +     +  +
 
2283
                        D..*..A..*..I..C..R..F..T..S..T..N..D..S..H..
 
2284
7260769 GGAAACTGAAACCGCAGATTAGGCTTAAATTTGTCGTTTTACTTCAACAAACGACTCGCATGGCGATAAAAA
 
2285
 
 
2286
                                [-2a]
 
2287
                                6.2e-07
 
2288
                                ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
2289
                                           +  +  +        +  +  +  +
 
2290
                                ..N..L..S..N..C..F..R..I..R..V..V..E..M..S..R
 
2291
7423777 CCCATTTGGTGGTAAACACGAAACATTCAAAGAATTACAAAACCGTATCCTCACGACTTCCATAGACCGTTG
 
2292
 
 
2293
                                                                        [+2b]
 
2294
                                                                        1.4e-07
 
2295
                                                                        L..E..K.
 
2296
                                                                        +     +
 
2297
                                                                        Y..Q..K.
 
2298
7530193 AAGAAGTCCTTGCCAACTCCCTCCATTGCTCAGTCTCCGGAACAAAATGAAAACGAAAATCCGATATCAAAA
 
2299
 
 
2300
        
 
2301
        
 
2302
        .E..V..V..R..V..W..F..C..N..R..R..Q..
 
2303
               +  +     +  +        +  +
 
2304
        .K..M..I..R..*..W..F..S..K..Q..R..K..
 
2305
7530265 GAAGATGATCAGATGATGGTTCTCGAAACAAAGAAAGCTGTTCAGAAAAGTCCAAGGCCCAACATCAAGGCT
 
2306
 
 
2307
               [-4b]
 
2308
               6.4e-07
 
2309
               ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
2310
                    +           +  +  +  +     +  +     +  +
 
2311
               ..Y..L..T..*..K..L..V..P..K..Y..A..I..L..N..N
 
2312
7605289 CACCACTGTATAGTGTTTATTTTAAGACAGGTTTGTAAGCTATTAAATTGTTTTTATTTATACTGAGTAGTT
 
2313
 
 
2314
                              [-4b]
 
2315
                              6.4e-07
 
2316
                              ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
2317
                                   +           +  +  +  +     +  +     +  +
 
2318
                              ..Y..L..T..*..K..L..V..P..K..Y..A..I..L..N..N
 
2319
7616521 TGATCCTTGCACTATCACCACTGTATAGTGTTTATTTTAAGACAGGTTTGTAAGCTATTAAATTGTTTTCAT
 
2320
 
 
2321
                           [+2b]
 
2322
                           8.8e-07
 
2323
                           L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
2324
                                       +  +  +     +  +     +
 
2325
                           R..S..M..G..V..V..R..I..W..F..Y..N..S..X..X..
 
2326
7782121 TGTTTTAAACAATTAACAACGGTCTATGGGGGTCGTGAGGATATGGTTTTATAATTCTNNNNNNNNNNNNNN
 
2327
 
 
2328
                          [-2a]
 
2329
                          8.1e-07
 
2330
                          ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
2331
                                     +     +  +     +  +  +
 
2332
                          ..N..L..Y..N..Y..F..W..I..R..V..V..G..I..S..R
 
2333
7789177 TGGTAGTAAACAAAGAACATTCAAATAATTATAAAACCATATCCTCACGACGCCTATAGACCGTTGTTAATT
 
2334
 
 
2335
                        [-2b]
 
2336
                        8.3e-08
 
2337
                        ..Q..R..R..N..C..F..W..V..R..V..V..E..K..E..L
 
2338
                                   +     +  +     +  +  +  +
 
2339
                        ..N..*..L..N..Y..F..W..I..R..V..V..E..M..S..Q
 
2340
7801705 GTAGTAAGCAAAGAACATTTTATAAATTATAAAACCATATCCTCACGACTTCCATAGACTGTTGTTAATTAT
 
2341
 
 
2342
                  [+1b]
 
2343
                  1.8e-07
 
2344
                  S..Q..T..T..I..C..R..F..E..A..L..Q..L..S..F..
 
2345
                  +        +  +        +  +  +     +  +  +
 
2346
                  S..L..A..T..I..Y..Y..F..E..S..H..Q..L..S..A..
 
2347
7825105 GGGGGATTCTTCACTAGCAACCATATATTATTTTGAATCACACCAATTGTCTGCAATATTCTAGCAAAAACA
 
2348
 
 
2349
                   [+2c]
 
2350
                   8.8e-07
 
2351
                   L..E..K..E..V..V..R..V..W..F..C..N..R..R..Q..
 
2352
                               +  +  +     +  +     +
 
2353
                   R..S..I..G..V..V..R..I..W..F..Y..N..S..L..I..
 
2354
7927561 ACAATTGACAACGGTCTATAGGAGTCGTGAGGATATGGTTTTATAATTCTTTAATTGTCCTTTTTTTACTCT
 
2355
 
 
2356
              [-4a]
 
2357
              8.1e-07
 
2358
              ..E..L..W..K..Q..L..L..P..K..L..K..C..M..N..K
 
2359
                         +  +  +           +  +     +  +  +
 
2360
              ..H..K..F..K..N..L..F..L..N..L..K..S..A..N..K
 
2361
8028217 CGTTTTGTGTTTAAACTTGTTTAAAAATAAATTTAATTTTGATGCATTTTTTAGTTTCTTTTTTTATATAAA
 
2362
 
 
2363
********************************************************************************
 
2364
 
 
2365
 
 
2366
CPU: ubuntu
 
2367
Time 470.725418 secs.
 
2368
 
 
2369
mast.bin test2.fasta.meme.out -nostatus -mt 1e-06 -ev 2e-02 -dna -brief -d /home/struckma/XXXXX/xxxxx.seq.fasta -text -stdout